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L2_040_071G1_scaffold_504

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_504_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2500
DNA (2499bp) protein (833aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=12 Tax=Escherichia coli RepID=B2N7W4_ECOLX
L2_040_071G1_scaffold_504_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2515..3096
DNA (582bp) protein (194aa)
LPS-assembly lipoprotein LptE n=52 Tax=Escherichia coli RepID=LPTE_ECO7I
rlpB; LPS-assembly lipoprotein RlpB
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L2_040_071G1_scaffold_504_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3096..4127
DNA (1032bp) protein (344aa)
DNA polymerase III delta subunit n=198 Tax=Enterobacteriaceae RepID=C3TJG5_ECOLX
holA; DNA polymerase III subunit delta
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AIF61528.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L2_040_071G1_scaffold_504_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4129..4770
DNA (642bp) protein (214aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Nicotinate-nucleotide adenylyltransferase n=688 Tax=Bacteria RepID=NADD_ECOLI
L2_040_071G1_scaffold_504_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4794..5405
DNA (612bp) protein (204aa)
Alpha-ribazole phosphatase n=35 Tax=Escherichia coli RepID=B1IYH0_ECOLC
alpha-ribazole phosphatase
Alpha-ribazole phosphatase {ECO:0000313|EMBL:EQY68319.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
L2_040_071G1_scaffold_504_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5665..5982
DNA (318bp) protein (106aa)
Ribosomal silencing factor RsfS n=1415 Tax=Enterobacteriaceae RepID=IOJAP_ECOL6
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L2_040_071G1_scaffold_504_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5986..6453
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli Xuzhou21.;"
Ribosomal RNA large subunit methyltransferase H n=1292 Tax=Enterobacteriaceae RepID=RLMH_ECO24
hypothetical protein
L2_040_071G1_scaffold_504_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6484..8385
DNA (1902bp) protein (634aa)
Penicillin-binding protein 2 n=1358 Tax=Enterobacteriaceae RepID=PBP2_ECO57
Penicillin-binding protein 2 {ECO:0000313|EMBL:EOV64979.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
mrdA; penicillin-binding protein 2
L2_040_071G1_scaffold_504_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8388..9500
DNA (1113bp) protein (371aa)
Rod shape-determining protein RodA n=983 Tax=Enterobacteriaceae RepID=RODA_ECO57
cell wall shape-determining protein
Rod shape-determining protein RodA {ECO:0000313|EMBL:EFE64688.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_040_071G1_scaffold_504_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9511..10599
DNA (1089bp) protein (363aa)
Rare lipoprotein A n=345 Tax=Enterobacteriaceae RepID=A7ZJ22_ECO24
rlpA; rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ENA07829.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
L2_040_071G1_scaffold_504_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10666..11949
DNA (1284bp) protein (428aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacA {ECO:0000313|EMBL:EFK13204.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EFK13204.1};; EC=3.5.2.6 {ECO:0000313|EMBL:EFK13204.1};; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
D-alanyl-D-alanine carboxypeptidase DacA n=1 Tax=Escherichia coli MS 146-1 RepID=E1HHW8_ECOLX
L2_040_071G1_scaffold_504_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12060..12323
DNA (264bp) protein (88aa)
UPF0250 protein YbeD n=1445 Tax=Enterobacteriaceae RepID=YBED_ECO24
hypothetical protein
UPF0250 protein YbeD {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L2_040_071G1_scaffold_504_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12424..13065
DNA (642bp) protein (214aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
lipoate-protein ligase B (EC:2.3.1.181)
Octanoyltransferase n=2 Tax=Escherichia coli RepID=L2VB97_ECOLX
L2_040_071G1_scaffold_504_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13324..14277
DNA (954bp) protein (318aa)
Uncharacterized HTH-type transcriptional regulator YbeF n=324 Tax=Enterobacteriaceae RepID=YBEF_ECOLI
ybeF; putative DNA-binding transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ESE04082.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_040_071G1_scaffold_504_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14486..15451
DNA (966bp) protein (322aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Lipoyl synthase n=2 Tax=Escherichia coli RepID=L2V8X7_ECOLX
lipA; lipoic acid synthetase LipA
L2_040_071G1_scaffold_504_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15552..15755)
DNA (204bp) protein (68aa)
Sec-independent protein translocase protein TatE n=1426 Tax=Enterobacteriaceae RepID=TATE_ECOLI
tatA; sec-independent translocase TatA
Probable Sec-independent protein translocase protein TatE {ECO:0000256|HAMAP-Rule:MF_00903}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L2_040_071G1_scaffold_504_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15884..16672)
DNA (789bp) protein (263aa)
Hydrolase YbeM n=724 Tax=Enterobacteriaceae RepID=YBEM_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESP10324.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L2_040_071G1_scaffold_504_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16765..17148
DNA (384bp) protein (128aa)
Putative fluoride ion transporter CrcB n=62 Tax=Enterobacteriaceae RepID=CRCB_ECOLC
crcB; camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1116002 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli C-34666.;"
L2_040_071G1_scaffold_504_19
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17202..17438)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJI0_CITK8
cspE; Cold shock protein
Cold shock protein {ECO:0000313|EMBL:ADA73023.1}; TaxID=591020 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri serotype X (strain 2002017).;"
Displaying 19 items

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