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L2_040_071G1_scaffold_163_16

Organism: L2_040_071G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 16820..20266

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1148.0
  • Bit_score: 2274
  • Evalue 0.0
Transcription-repair-coupling factor n=3 Tax=Citrobacter RepID=J0MAF3_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1148.0
  • Bit_score: 2275
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 1148.0
  • Bit_score: 2251
  • Evalue 0.0

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3447
ATGCCTGAACAACATCGTTACACGCTCCCAGCGAAAGCTGGCGATCAGCGCCAGTTGGGTGAGCTTACCGGTGCCGCCTGCGCAACGCTGGTCGCCGAAATCGCCGAACATCACGCCGGTCCAGTGGTGCTGATCGCGCCGGACATGCAAAATGCTTTGCGCCTGCATGATGAAATTCGTCAGTTTACCGACCAGATGGTGATGAACCTGGCCGACTGGGAAACGCTGCCCTATGACAGCTTTTCTCCCCATCAGGAGATTATCTCTTCGCGTCTCTCTACGCTGTATCAACTGCCTGCCATGCAGCGAGGCGTACTGATCGTTCCGGTAAATACCCTGATGCAGCGTGTCTGTCCGCACAGCTATCTGCACGGGCATGCGCTGGTCATGAAAAAAGGTCAGCGGCTTTCGCGCGACGCCCTGCGCGAACAGCTGGATAGCGCTGGCTATCGCCATGTTGATCAGGTCATGGAACACGGCGAATACGCCACGCGCGGCGCGTTGTTGGATCTGTTCCCGATGGGCAGCGAGCTGCCTTATCGTCTGGATTTCTTTGATGACGAAATCGACAGCCTGCGTCTGTTTGATACCGACACCCAGCGCACGCTGGAAGAAGTCGATGCCATTAATTTGCTTCCCGCGCACGAATTCCCGACTGACAAAACGGCCATCGAGCTATTCCGTAGTCAGTGGCGCGATACCTTTGAGGTTAAACGCGACGCCGAACATATTTATCAGCAGGTCAGCAAAGGCACGTTACCTGCGGGTATTGAATACTGGCAACCGCTGTTTTTCAGCGAGCCGCTGCCGCCGCTGTTCAGCTACTTCCCCGCCAATACGTTATTGGTCAATACCGGTGATATCGAGACCAGCGCAGAACGCTTCCAGGCCGATACCCTGTCACGCTTTGAAAATCGCGGTGTTGATCCGATGCGCCCGCTTCTGCCACCGGAATCGCTGTGGCTGCGGGTTGATGAGCTGTTTTCTGAACTTAAACGCTGGCCGCGCGTTCAACTGAAAACCGAGAGTCTGGCGAACAAAGCTGCGAATACCAACCTCGGGTTCCAGAAGCTGCCGGACATCGCCGTGCAGGCACAGCAAAAATCACCGTTAGATGCGTTACGTAAATTCCTTGAGGGCTTTACCGGACCGGTGATTTTCTCGGTCGAAAGTGAAGGCCGACGTGAAGCGCTTGGCGAGTTGCTCGCTCGTATCAAAGTGGCACCGAAGCGGATATTGCGACTCGATGAAGCCGTAGATAACGGTCGTTATCTGATGATTGGCGCAGCTGAGCACGGCTTCATCGATAGCAAACGCAATCTGGCACTGATTTGTGAAAGCGATCTGCTTGGGGAACGCGTGGCGCGTCGCCGCCAGGATTCGCGTCGCACCATCAACCCGGATACCTTAATTCGTAACCTTGCAGAGCTGCATCCCGGTCAGCCGGTAGTGCATCTGGAACACGGCGTGGGTCGCTATGCCGGGATGACCACGCTGGAAGCGGGCGGTATCACCGGTGAGTATCTGATGCTCACCTATGCCAACGACGCCAAACTGTACGTGCCGGTATCGTCACTGCATCTGATCAGCCGCTATGCGGGCGGTGCAGAAGAGAATGCGCCGCTGCATAAACTGGGCGGCGATGCCTGGTCACGCGCCCGACAGAAAGCCGCTGAGAAGGTGCGCGATGTCGCGGCAGAGCTGCTGGATATTTATGCCCAGCGCGCGGCGAAAGAAGGCTTTGCCTTTAAGCATGACCGTGAACAGTATCAGCTGTTTTGCGACAGCTTCCCGTTTGAAACCACGCCTGACCAGGCGCAGGCGATCAACGCTGTACTCAGCGATATGTGTCAACCGCTGGCCATGGACCGCCTGGTGTGCGGCGACGTCGGTTTTGGTAAAACCGAAGTCGCGATGCGCGCCGCCTTCCTTGCCGTAGAGAACCACAAACAGGTTGCCGTGCTGGTTCCGACTACCCTGCTCGCACAGCAGCACTTCGACAACTTCCGCGATCGTTTTGCCAACTGGCCGGTACGCATTGAGATGTTGTCCCGTTTCCGTAGCGCCAAAGAGCAAGCGCATATTCTGGAGCAGGTTGCCGAGGGGAAAATTGATATTCTCATCGGTACGCACAAACTGCTGCAAGCAGATGTGAAGTTAAAAGATCTGGGTCTGCTGATTGTCGATGAAGAGCACCGTTTCGGCGTTCGCCACAAAGAACGCATCAAGGCGATGCGTGCGGATGTCGATATTCTGACCCTGACGGCAACGCCTATTCCGCGTACGCTCAATATGGCGATGAGCGGCATGCGCGATCTGTCGATCATCGCCACGCCGCCTGCTCGTCGTCTGGCGGTCAAAACCTTCGTGCGCGAATACGACAGCCTGGTAGTACGCGAGGCGATCCTGCGTGAAGTTCTGCGCGGGGGACAAGTTTATTATCTGTTTAACGACGTCGAAAATATCCAGAAAACCGCTGACAGATTAGCAGAACTGGTGCCGGAAGCGCGTATTGGTATCGGCCACGGGCAAATGCGCGAGCGCGAGCTGGAACGCGTGATGAACGATTTCCACCATCAGCGTTTTAACGTGCTGGTGTGTACCACCATTATCGAAACCGGGATCGACATTCCGACCGCCAACACCATTATCATCGAACGTGCCGATCACTTTGGTTTAGCGCAATTGCACCAGCTACGCGGTCGTGTGGGACGCTCACACCATCAGGCGTACGCCTGGCTGCTGACGCCGCATCCAAAAGCAATGACCACCGACGCGCAAAAGCGTCTGGAAGCCATCGCCTCGCTGGAAGATTTGGGTGCAGGATTTGCGCTGGCGACCCACGACCTTGAAATTCGCGGCGCCGGGGAACTGCTGGGTGAAGATCAAAGTGGTTCCATGGAAAGCATCGGCTTCTCGCTGTATATGGAGCTGCTGGAAAACGCGGTCGATGCGCTCAAAGAAGGGCGTGAGCCGTCACTGGAAGATCTCACCAGCCAGCAAACCGAAGTTGAACTGCGTATGCCGTCTCTGCTGCCGGATGACTATATACCGGATGTTAACACCCGACTATCGTTCTACAAGCGCATTGCCAGCGCGAAAGGCGAAAACGAACTGGAAGAGATTAAGGTCGAGCTGATAGATCGTTTTGGCCTGCTGCCCGACCCGGCTCGTACGTTGCTGGATATCGCTCGTTTACGCCAGCAGGCGCAGAAACTGGGGATCAGAAAGCTCGAAGGTCATGACAAAGGCGGTACCATTGAATTTGCCGAGAAAAACCACGTCAACCCGGTCTGGCTGATTGGTTTACTGCAAAAACAACCGCAACACTTCCGTCTGGACGGCCCAACCCGACTGAAATTTATGCAGGATCTGGGCGAGCGTAAAACGCGGATCGACTGGGTCCGCCAGTTTATGCGTCAGCTTGAAGAAAACGCCGTAGCATAG
PROTEIN sequence
Length: 1149
MPEQHRYTLPAKAGDQRQLGELTGAACATLVAEIAEHHAGPVVLIAPDMQNALRLHDEIRQFTDQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPAMQRGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALREQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRLFDTDTQRTLEEVDAINLLPAHEFPTDKTAIELFRSQWRDTFEVKRDAEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDIETSAERFQADTLSRFENRGVDPMRPLLPPESLWLRVDELFSELKRWPRVQLKTESLANKAANTNLGFQKLPDIAVQAQQKSPLDALRKFLEGFTGPVIFSVESEGRREALGELLARIKVAPKRILRLDEAVDNGRYLMIGAAEHGFIDSKRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHPGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSAKEQAHILEQVAEGKIDILIGTHKLLQADVKLKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREVLRGGQVYYLFNDVENIQKTADRLAELVPEARIGIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGSMESIGFSLYMELLENAVDALKEGREPSLEDLTSQQTEVELRMPSLLPDDYIPDVNTRLSFYKRIASAKGENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGHDKGGTIEFAEKNHVNPVWLIGLLQKQPQHFRLDGPTRLKFMQDLGERKTRIDWVRQFMRQLEENAVA*