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L2_040_071G1_scaffold_163

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_163_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11..1381
DNA (1371bp) protein (457aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS74_CITFR
L2_040_071G1_scaffold_163_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1546..2217
DNA (672bp) protein (224aa)
DNA-binding transcriptional regulator PhoP n=5 Tax=Citrobacter RepID=J0VWD5_9ENTR
Transcriptional regulatory protein PhoP {ECO:0000313|EMBL:CDL40186.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator
L2_040_071G1_scaffold_163_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2217..3680
DNA (1464bp) protein (488aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Sensor protein PhoQ n=3 Tax=Citrobacter RepID=J1G7Q9_9ENTR
sensor protein PhoQ
L2_040_071G1_scaffold_163_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3772..4893
DNA (1122bp) protein (374aa)
Cupin family protein n=7 Tax=Citrobacter RepID=J0M3S1_9ENTR
Cupin 4 family protein {ECO:0000313|EMBL:ETX70538.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_163_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4996..6222)
DNA (1227bp) protein (409aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Peptidase T n=1 Tax=Citrobacter sp. 30_2 RepID=C1M3E5_9ENTR
peptidase T
L2_040_071G1_scaffold_163_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6473..7609
DNA (1137bp) protein (379aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Putrescine/spermidine ABC transporter ATPase n=6 Tax=Citrobacter RepID=J0MAG5_9ENTR
potA; putrescine/spermidine ABC transporter ATPase
L2_040_071G1_scaffold_163_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..8450
DNA (858bp) protein (286aa)
Spermidine/putrescine transport system permease protein PotB n=5 Tax=Citrobacter RepID=J0VWD1_9ENTR
potB; spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AHY12912.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_040_071G1_scaffold_163_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8447..9226
DNA (780bp) protein (260aa)
Spermidine/putrescine transport system permease potC n=10 Tax=Enterobacteriaceae RepID=G9SI61_CITFR
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KJC09835.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
potC; spermidine/putrescine ABC transporter permease
L2_040_071G1_scaffold_163_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9251..10300
DNA (1050bp) protein (350aa)
Putrescine-binding periplasmic protein n=8 Tax=Citrobacter RepID=C1M3E1_9ENTR
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
potD; spermidine/putrescine ABC transporter substrate-binding protein
L2_040_071G1_scaffold_163_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10400..11221)
DNA (822bp) protein (274aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
NAD-dependent protein deacylase n=6 Tax=Citrobacter RepID=J1G7I8_9ENTR
NAD-dependent deacetylase
L2_040_071G1_scaffold_163_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11237..12148)
DNA (912bp) protein (304aa)
N-acetyl-D-glucosamine kinase {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012116}; EC=2.7.1.59 {ECO:0000256|HAMAP-Rule:MF_01271};; GlcNAc kinase {ECO:0000256|HAMAP-Rule:MF_01271}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
N-acetylglucosamine kinase (EC:2.7.1.59)
N-acetyl-D-glucosamine kinase n=6 Tax=Citrobacter RepID=J0MAF9_9ENTR
L2_040_071G1_scaffold_163_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12238..13482)
DNA (1245bp) protein (415aa)
Lipoprotein-releasing system transmembrane protein lolE n=7 Tax=Citrobacter RepID=G9SI57_CITFR
Liporeleasing system, transmembrane protein LolE {ECO:0000313|EMBL:KEL82444.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
outer membrane-specific lipoprotein transporter subunit LolE
L2_040_071G1_scaffold_163_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13482..14183)
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Lipoprotein transporter ATP-binding subunit n=6 Tax=Citrobacter RepID=J1G7Q3_9ENTR
lolD; lipoprotein ABC transporter ATP-binding protein
L2_040_071G1_scaffold_163_14
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14176..15465)
DNA (1290bp) protein (430aa)
Outer membrane-specific lipoprotein transporter subunit LolC n=9 Tax=Enterobacteriaceae RepID=J0M3R0_9ENTR
Lipoprotein-releasing system transmembrane protein lolC {ECO:0000313|EMBL:EOQ50795.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
outer membrane-specific lipoprotein transporter subunit LolC
L2_040_071G1_scaffold_163_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15637..16701
DNA (1065bp) protein (355aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=J1G7I3_9ENTR
Inner membrane protein YcfT {ECO:0000313|EMBL:ETX70527.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_071G1_scaffold_163_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16820..20266
DNA (3447bp) protein (1149aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Transcription-repair-coupling factor n=3 Tax=Citrobacter RepID=J0MAF3_9ENTR
transcription-repair coupling factor
L2_040_071G1_scaffold_163_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20416..21381
DNA (966bp) protein (322aa)
L,D-transpeptidase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QIM5_CITFR
Peptigoglycan-binding protein LysM {ECO:0000313|EMBL:KJC11649.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
peptigoglycan-binding protein LysM
L2_040_071G1_scaffold_163_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21468..21791)
DNA (324bp) protein (108aa)
Multiple stress resistance protein BhsA n=10 Tax=Enterobacteriaceae RepID=C1M3D1_9ENTR
Multiple stress resistance protein BhsA {ECO:0000313|EMBL:ETX64405.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_040_071G1_scaffold_163_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21968..22603
DNA (636bp) protein (212aa)
TetR/AcrR family transcriptional regulator n=5 Tax=Citrobacter RepID=J0M3Q5_9ENTR
TetR family transcriptional regulator {ECO:0000313|EMBL:KJC11650.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
TetR family transcriptional regulator
L2_040_071G1_scaffold_163_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22859..25039
DNA (2181bp) protein (727aa)
Aerobactin siderophore receptor IutA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CBG4_CITFR
Ligand-gated channel protein {ECO:0000313|EMBL:KJC11651.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ligand-gated channel protein
L2_040_071G1_scaffold_163_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25097..25636)
DNA (540bp) protein (180aa)
Uncharacterized protein n=11 Tax=Citrobacter RepID=C1M3C8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF19201.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
L2_040_071G1_scaffold_163_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25805..27109)
DNA (1305bp) protein (435aa)
NADH dehydrogenase n=4 Tax=Citrobacter RepID=J0VWB9_9ENTR
NADH dehydrogenase {ECO:0000313|EMBL:KJC09822.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
NADH dehydrogenase
L2_040_071G1_scaffold_163_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27346..27888)
DNA (543bp) protein (181aa)
UPF0227 protein CSAG_00899 n=12 Tax=Citrobacter RepID=C1M3C5_9ENTR
hypothetical protein
UPF0227 protein YcfP {ECO:0000256|HAMAP-Rule:MF_01047}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_040_071G1_scaffold_163_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27910..28935)
DNA (1026bp) protein (342aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
beta-hexosaminidase (EC:3.2.1.52)
Beta-hexosaminidase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS44_CITFR
L2_040_071G1_scaffold_163_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28946..29770)
DNA (825bp) protein (275aa)
thiK; thiamine kinase (EC:2.7.1.89)
Thiamine kinase n=3 Tax=Citrobacter RepID=J1G7H5_9ENTR
Thiamine kinase {ECO:0000313|EMBL:ETX70516.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_163_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29751..30392)
DNA (642bp) protein (214aa)
Penicillin-binding protein activator LpoB n=4 Tax=Citrobacter RepID=J0MAE0_9ENTR
Penicillin-binding protein activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889}; Short=PBP activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889};; Flags: Precursor;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
penicillin-binding protein
L2_040_071G1_scaffold_163_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30406..30780)
DNA (375bp) protein (125aa)
Lipoprotein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QIL5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX70514.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_071G1_scaffold_163_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30783..31142)
DNA (360bp) protein (120aa)
HIT-like protein hinT n=8 Tax=Citrobacter RepID=C1M3C0_9ENTR
purine nucleoside phosphoramidase
Purine nucleoside phosphoramidase {ECO:0000313|EMBL:KJC11659.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_040_071G1_scaffold_163_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31492..33678
DNA (2187bp) protein (729aa)
Ferric-rhodotorulic acid outer membrane transporter n=3 Tax=Citrobacter RepID=J0M3P3_9ENTR
Ferric-rhodotorulic acid transporter {ECO:0000313|EMBL:KJC09816.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ferric-rhodotorulic acid outer membrane transporter
L2_040_071G1_scaffold_163_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33701..34297)
DNA (597bp) protein (199aa)
Phenylacetic acid degradation protein paaY n=3 Tax=Citrobacter RepID=J1G7H0_9ENTR
Phenylacetic acid degradation protein paaY {ECO:0000313|EMBL:ETX70511.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
carnitine operon protein CaiE
Displaying items 1-30 of 69 in total

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