ggKbase home page

L2_040_089G1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_17_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154..477
DNA (324bp) protein (108aa)
Exodeoxyribonuclease 8 n=1 Tax=Escherichia coli KTE114 RepID=S0TK47_ECOLX
exonuclease VIII
Exodeoxyribonuclease 8 {ECO:0000313|EMBL:ESA70935.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
L2_040_089G1_scaffold_17_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

470..1279
DNA (810bp) protein (270aa)
Protein RecT n=111 Tax=Enterobacteriaceae RepID=B7A361_ECO57
recT; recombination and repair protein RecT
Recombination and repair protein RecT {ECO:0000313|EMBL:ESA70936.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
L2_040_089G1_scaffold_17_3
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1522..1710
DNA (189bp) protein (63aa)
GydaC n=4 Tax=Escherichia coli RepID=E9XLQ1_ECOLX
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV49671.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L2_040_089G1_scaffold_17_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1810..2025
DNA (216bp) protein (72aa)
Uncharacterized protein YdaQ n=360 Tax=Enterobacteriaceae RepID=YDAQ_ECOLI
hypothetical protein
Phage excisionase {ECO:0000313|EMBL:EQZ93753.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L2_040_089G1_scaffold_17_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2027..3262
DNA (1236bp) protein (412aa)
Rac prophage integrase n=133 Tax=Enterobacteriaceae RepID=B7A365_ECO57
intR; integrase for prophage CP-933R
Phage integrase {ECO:0000313|EMBL:ELC09747.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_089G1_scaffold_17_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3314..4249
DNA (936bp) protein (312aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=193 Tax=Enterobacteriaceae RepID=TTCA_ECO57
ydaO; C32 tRNA thiolase
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L2_040_089G1_scaffold_17_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4378..5751)
DNA (1374bp) protein (458aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
ATP-dependent RNA helicase DbpA n=146 Tax=Escherichia RepID=DBPA_ECOLI
dbpA; ATP-dependent RNA helicase DbpA
L2_040_089G1_scaffold_17_8
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5781..5954)
DNA (174bp) protein (58aa)
Uncharacterized protein n=609 Tax=Escherichia RepID=J7R0K2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELC19104.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
L2_040_089G1_scaffold_17_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6229..7212)
DNA (984bp) protein (328aa)
Zinc transport protein ZntB n=1222 Tax=Enterobacteriaceae RepID=ZNTB_ECO24
zntB; zinc transport protein ZntB
Zinc transport protein ZntB {ECO:0000256|HAMAP-Rule:MF_01565, ECO:0000256|SAAS:SAAS00010762}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L2_040_089G1_scaffold_17_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7467..8699
DNA (1233bp) protein (411aa)
Diguanylate cyclase n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2RBV6_ECOLX
Diguanylate cyclase {ECO:0000313|EMBL:ESK10526.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
putative signaling protein
L2_040_089G1_scaffold_17_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8720..9283)
DNA (564bp) protein (188aa)
Probable DNA endonuclease SmrA n=204 Tax=Enterobacteriaceae RepID=SMRA_ECOLI
hypothetical protein
Putative Smr domain protein {ECO:0000313|EMBL:EGI10925.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L2_040_089G1_scaffold_17_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9613..10521)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=451 Tax=Enterobacteriaceae RepID=B1ISS2_ECOLC
putative DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDX87540.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L2_040_089G1_scaffold_17_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10697..12007
DNA (1311bp) protein (437aa)
Predicted peptidase, aminobenzoyl-glutamate utilization protein AbgA n=168 Tax=Enterobacteriaceae RepID=C8UPD7_ECO1A
abgA; aminobenzoyl-glutamate utilization protein A
Aminobenzoyl-glutamate utilization protein A {ECO:0000313|EMBL:EFK74155.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L2_040_089G1_scaffold_17_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12007..13452
DNA (1446bp) protein (482aa)
p-aminobenzoyl-glutamate hydrolase subunit B n=109 Tax=Escherichia RepID=ABGB_ECOLI
abgB; aminobenzoyl-glutamate utilization protein B
Amidohydrolase family protein {ECO:0000313|EMBL:ENB28807.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L2_040_089G1_scaffold_17_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13489..15015
DNA (1527bp) protein (509aa)
Aminobenzoyl-glutamate transport protein n=26 Tax=Escherichia coli RepID=A7ZZS8_ECOHS
abgT; aminobenzoyl-glutamate transporter
Aminobenzoyl-glutamate transport protein {ECO:0000313|EMBL:EFK27629.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
L2_040_089G1_scaffold_17_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15026..15541
DNA (516bp) protein (172aa)
ogt; O-6-alkylguanine-DNA:cysteine-protein methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
Methylated-DNA--protein-cysteine methyltransferase n=274 Tax=Enterobacteriaceae RepID=J7R415_ECOLX
L2_040_089G1_scaffold_17_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15736..16488
DNA (753bp) protein (251aa)
CRP/FNR family transcriptional regulator n=1 Tax=Escherichia coli B088 RepID=D6HWA1_ECOLX
fumarate and nitrate reduction regulatory protein
Electron transport regulator A {ECO:0000313|EMBL:EHU41916.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_040_089G1_scaffold_17_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16640..17590
DNA (951bp) protein (317aa)
Universal stress protein E n=1135 Tax=Enterobacteriaceae RepID=USPE_ECO57
universal stress protein E UspE
Universal stress protein E {ECO:0000313|EMBL:KDZ38865.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L2_040_089G1_scaffold_17_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17640..17897)
DNA (258bp) protein (86aa)
Uncharacterized protein YnaJ n=1383 Tax=Enterobacteriaceae RepID=YNAJ_ECO57
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EQN28593.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_040_089G1_scaffold_17_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18141..19172
DNA (1032bp) protein (344aa)
Low conductance mechanosensitive channel YnaI n=712 Tax=Enterobacteriaceae RepID=YNAI_ECO57
Mechanosensitive ion channel
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:ESD99104.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_040_089G1_scaffold_17_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19223..20836)
DNA (1614bp) protein (538aa)
Periplasmic murein peptide-binding protein n=2 Tax=Escherichia coli RepID=L2V2H2_ECOLX
Periplasmic murein peptide-binding protein {ECO:0000313|EMBL:ELC09731.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
extracellular solute-binding protein family 5
L2_040_089G1_scaffold_17_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21173..22072)
DNA (900bp) protein (300aa)
Uncharacterized HTH-type transcriptional regulator YcjZ n=170 Tax=Enterobacteriaceae RepID=YCJZ_ECOLI
ycjZ; DNA-binding transcriptional regulator, LYSR-type
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDY94379.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L2_040_089G1_scaffold_17_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22210..23130
DNA (921bp) protein (307aa)
Uncharacterized protein YcjY n=141 Tax=Escherichia RepID=YCJY_ECOLI
ycjY; hydrolase
Uncharacterized protein {ECO:0000313|EMBL:KEN99900.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_089G1_scaffold_17_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23201..23383
DNA (183bp) protein (61aa)
Putative uncharacterized protein YmjC n=219 Tax=Enterobacteriaceae RepID=YMJC_ECOLI
ymjC; putative oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:KDY62908.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_040_089G1_scaffold_17_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23465..24193
DNA (729bp) protein (243aa)
Protein MpaA n=455 Tax=Enterobacteriaceae RepID=MPAA_ECO57
peptidase M14 carboxypeptidase A
Zinc carboxypeptidase {ECO:0000313|EMBL:EFK27619.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
L2_040_089G1_scaffold_17_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24168..25133)
DNA (966bp) protein (322aa)
L-Ala-D/L-Glu epimerase {ECO:0000313|EMBL:KDY62906.1}; EC=5.1.1.- {ECO:0000313|EMBL:KDY62906.1};; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L-Ala-D/L-Glu epimerase n=133 Tax=Escherichia RepID=AEEP_ECOLI
ycjG; L-Ala-D/L-Glu epimerase
L2_040_089G1_scaffold_17_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25252..25758
DNA (507bp) protein (169aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
Thiol peroxidase n=1117 Tax=Enterobacteriaceae RepID=TPX_ECO57
tpx; thiol peroxidase
L2_040_089G1_scaffold_17_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25802..27343)
DNA (1542bp) protein (514aa)
Transcriptional regulatory protein TyrR n=301 Tax=Enterobacteriaceae RepID=TYRR_ECOLI
tyrR; DNA-binding transcriptional regulator TyrR
Sigma-54 interaction domain protein {ECO:0000313|EMBL:ESA97936.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L2_040_089G1_scaffold_17_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27491..28552)
DNA (1062bp) protein (354aa)
UPF0283 membrane protein YcjF n=565 Tax=Escherichia RepID=YCJF_ECO45
hypothetical protein
UPF0283 membrane protein YcjF {ECO:0000256|HAMAP-Rule:MF_01085}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
L2_040_089G1_scaffold_17_30
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28549..29946)
DNA (1398bp) protein (466aa)
Conserved protein n=17 Tax=Escherichia coli RepID=C6EFR1_ECOBD
hypothetical protein
Conserved protein YcjX with nucleoside triphosphate hydrolase domain {ECO:0000313|EMBL:CDK76524.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
Displaying items 1-30 of 116 in total

View Taxonomy