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L2_040_089G1_scaffold_29

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_29_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..83
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
IS1 ORF2
Putative transposase {ECO:0000313|EMBL:KDA59809.1}; Flags: Fragment;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L2_040_089G1_scaffold_29_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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483..1349
DNA (867bp) protein (289aa)
Bifunctional protein FolD n=310 Tax=Enterobacteriaceae RepID=FOLD_ECO8A
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_040_089G1_scaffold_29_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1351..1563
DNA (213bp) protein (71aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=I0VAB1_SHIFL
hypothetical protein
Ribosome-associated protein {ECO:0000313|EMBL:EOW09960.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L2_040_089G1_scaffold_29_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1671..2192
DNA (522bp) protein (174aa)
Inner membrane protein ybcI n=2 Tax=Escherichia coli RepID=L2V7Z4_ECOLX
Inner membrane protein ybcI {ECO:0000313|EMBL:ELC11636.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_089G1_scaffold_29_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2228..3613)
DNA (1386bp) protein (462aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
Cysteine--tRNA ligase n=785 Tax=Enterobacteriaceae RepID=SYC_ECO24
L2_040_089G1_scaffold_29_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3787..4281
DNA (495bp) protein (165aa)
ppiB; peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Peptidyl-prolyl cis-trans isomerase B n=303 Tax=Escherichia RepID=PPIB_ECOLI
L2_040_089G1_scaffold_29_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4284..5006
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
UDP-2,3-diacylglucosamine hydrolase n=234 Tax=Enterobacteriaceae RepID=LPXH_ECO24
lpxH; UDP-2,3-diacylglucosamine hydrolase
L2_040_089G1_scaffold_29_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5215..5532
DNA (318bp) protein (106aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Escherichia coli RepID=I0VQP4_ECOLX
phosphoribosylaminoimidazole carboxylase catalytic subunit
L2_040_089G1_scaffold_29_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5529..6596
DNA (1068bp) protein (356aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
N5-carboxyaminoimidazole ribonucleotide synthase n=3 Tax=Escherichia coli RepID=L2V7Z0_ECOLX
purK; N5-carboxyaminoimidazole ribonucleotide synthase
L2_040_089G1_scaffold_29_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6801..7694)
DNA (894bp) protein (298aa)
ybcF; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=313 Tax=Enterobacteriaceae RepID=A7ZXH5_ECOHS
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 541-15.;"
L2_040_089G1_scaffold_29_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7691..8506)
DNA (816bp) protein (272aa)
Uncharacterized protein n=72 Tax=Escherichia coli RepID=B2N8S3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFJ88266.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
hypothetical protein
L2_040_089G1_scaffold_29_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8517..9776)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=54 Tax=Escherichia coli RepID=B2N8S4_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW23114.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE108.;"
L2_040_089G1_scaffold_29_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9786..11453)
DNA (1668bp) protein (556aa)
Bacterial FdrA protein n=67 Tax=Escherichia coli RepID=A7ZXH2_ECOHS
membrane protein FdrA
Membrane protein FdrA {ECO:0000313|EMBL:EFK70931.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
L2_040_089G1_scaffold_29_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11770..12819
DNA (1050bp) protein (350aa)
Ureidoglycolate dehydrogenase {ECO:0000313|EMBL:KEJ70722.1}; EC=1.1.1.154 {ECO:0000313|EMBL:KEJ70722.1};; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
Ureidoglycolate dehydrogenase (NAD(+)) n=121 Tax=Escherichia RepID=ALLD_ECOLI
allD; Ureidoglycolate dehydrogenase
L2_040_089G1_scaffold_29_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12841..14076
DNA (1236bp) protein (412aa)
Allantoate amidohydrolase {ECO:0000313|EMBL:KDX84930.1}; EC=3.5.3.9 {ECO:0000313|EMBL:KDX84930.1};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Allantoate amidohydrolase n=89 Tax=Escherichia RepID=ALLC_ECOLI
ylbB; Allantoate amidohydrolase
L2_040_089G1_scaffold_29_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14087..14872
DNA (786bp) protein (262aa)
Uncharacterized protein YlbA n=91 Tax=Enterobacteriaceae RepID=YLBA_ECOLI
allantoin catabolism protein
Putative allantoin catabolism protein {ECO:0000313|EMBL:ESD97766.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_040_089G1_scaffold_29_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15001..16146)
DNA (1146bp) protein (382aa)
Glycerate kinase 1 n=2 Tax=Escherichia coli RepID=L2V8N5_ECOLX
Glycerate kinase 1 {ECO:0000313|EMBL:ELC11623.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
glycerate kinase
L2_040_089G1_scaffold_29_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16168..17469)
DNA (1302bp) protein (434aa)
Uracil/xanthine transporter n=4 Tax=Escherichia coli RepID=L2VAR1_ECOLX
Putative permease {ECO:0000313|EMBL:ESA88825.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
ybbY; putative uracil/xanthine transporter
L2_040_089G1_scaffold_29_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17526..18887)
DNA (1362bp) protein (454aa)
allantoinase (EC:3.5.2.5)
Allantoinase {ECO:0000256|HAMAP-Rule:MF_01645}; EC=3.5.2.5 {ECO:0000256|HAMAP-Rule:MF_01645};; Allantoin-utilizing enzyme {ECO:0000256|HAMAP-Rule:MF_01645}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Allantoinase n=522 Tax=Enterobacteriaceae RepID=ALLB_ECO55
L2_040_089G1_scaffold_29_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18948..20402)
DNA (1455bp) protein (485aa)
NCS1 nucleoside transporter n=7 Tax=Escherichia coli RepID=L2VB01_ECOLX
putative allantoin permease
NCS1 nucleoside transporter {ECO:0000313|EMBL:ELC11620.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_089G1_scaffold_29_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20571..21266)
DNA (696bp) protein (232aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EZK26331.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EZK26331.1};; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
Tartronate semialdehyde reductase, NADH-dependent n=9 Tax=Escherichia coli RepID=B7M4L3_ECO8A
glxR; tartronate semialdehyde reductase, NADH-dependent
L2_040_089G1_scaffold_29_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21297..21449)
DNA (153bp) protein (51aa)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Escherichia coli 2845650 RepID=M8Y1K6_ECOLX
glxR; tartronate semialdehyde reductase
Tartronate semialdehyde reductase {ECO:0000313|EMBL:KDV39222.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_040_089G1_scaffold_29_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21549..22325)
DNA (777bp) protein (259aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
Hydroxypyruvate isomerase n=10 Tax=Escherichia coli RepID=L2VAQ5_ECOLX
hydroxypyruvate isomerase
L2_040_089G1_scaffold_29_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22338..24119)
DNA (1782bp) protein (594aa)
gcl; glyoxylate carboligase (EC:4.1.1.47)
Glyoxylate carboligase n=5 Tax=Escherichia coli RepID=L2V7X7_ECOLX
Glyoxylate carboligase {ECO:0000313|EMBL:ESK03001.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L2_040_089G1_scaffold_29_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24209..25024)
DNA (816bp) protein (272aa)
HTH-type transcriptional repressor AllR n=585 Tax=Enterobacteriaceae RepID=ALLR_ECO57
DNA-binding transcriptional repressor AllR
DNA-binding transcriptional repressor AllR {ECO:0000313|EMBL:EMD14751.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L2_040_089G1_scaffold_29_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25102..25584)
DNA (483bp) protein (161aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
Ureidoglycolate lyase n=751 Tax=Enterobacteriaceae RepID=ALLA_ECO57
ureidoglycolate hydrolase YbbT
L2_040_089G1_scaffold_29_27
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25814..26740
DNA (927bp) protein (309aa)
Bacterial regulatory helix-turn-helix protein, lysR family protein n=5 Tax=Shigella flexneri RepID=F5MYG4_SHIFL
Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:EGK27665.1}; TaxID=766145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri VA-6.;"
ybbS; DNA-binding transcriptional activator AllS
L2_040_089G1_scaffold_29_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26809..27903
DNA (1095bp) protein (365aa)
tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035457};; Selenophosphate-dependent tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
tRNA 2-selenouridine synthase n=243 Tax=Escherichia coli RepID=SELU_ECO57
tRNA 2-selenouridine synthase
L2_040_089G1_scaffold_29_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28616..31030)
DNA (2415bp) protein (805aa)
Efflux ABC transporter, permease protein n=52 Tax=Escherichia coli RepID=A7ZXF6_ECOHS
putative inner membrane protein
Putative oxidoreductase {ECO:0000313|EMBL:CCK45651.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
L2_040_089G1_scaffold_29_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31027..31713)
DNA (687bp) protein (229aa)
ABC transporter ATP-binding protein n=2 Tax=Escherichia coli RepID=L2VAZ1_ECOLX
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESK03007.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
ybbA; Putative ABC transporter
Displaying items 1-30 of 88 in total

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