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L2_040_089G1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_33_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
cca; CCA-adding enzyme Cca (EC:2.7.7.72)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridium butyricum RepID=M8JJG6_CLOBU
Polynucleotide adenylyltransferase {ECO:0000313|EMBL:KHD16157.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_040_089G1_scaffold_33_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(279..1175)
DNA (897bp) protein (299aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium butyricum RepID=B1R1E8_CLOBU
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:KJZ83889.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator
L2_040_089G1_scaffold_33_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1344..2060)
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22)
Pseudouridine synthase n=3 Tax=Clostridium butyricum RepID=B1R1E9_CLOBU
L2_040_089G1_scaffold_33_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2232..3680)
DNA (1449bp) protein (483aa)
TrkH family potassium uptake protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUH5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85360.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
trkH; Trk system potassium uptake protein TrkH
L2_040_089G1_scaffold_33_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3670..4356)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ51_CLOBU
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:KJZ83881.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
trkA; potassium transporter peripheral membrane protein
L2_040_089G1_scaffold_33_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4337..5035)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ51_CLOBU
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:KJZ83881.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
trkA; potassium transporter peripheral membrane component
L2_040_089G1_scaffold_33_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5307..5891
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWH9_CLOBU
Serine/threonine kinase-like protein {ECO:0000313|EMBL:KJZ83839.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
serine/threonine kinase-like protein
L2_040_089G1_scaffold_33_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5935..6426)
DNA (492bp) protein (164aa)
Metal dependent phosphohydrolase n=2 Tax=Clostridium butyricum RepID=M8JKT7_CLOBU
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:KJZ85373.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
metal dependent phosphohydrolase
L2_040_089G1_scaffold_33_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6524..6841)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1F4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83914.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_33_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7067..9805)
DNA (2739bp) protein (913aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEE2_CLOBU
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:ENZ36404.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
calcium-transporting ATPase
L2_040_089G1_scaffold_33_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10097..10636)
DNA (540bp) protein (180aa)
Phosphoesterase, hxtx n=2 Tax=Clostridium butyricum RepID=M8K648_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36403.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphoesterase, HXTX
L2_040_089G1_scaffold_33_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11002..12663)
DNA (1662bp) protein (554aa)
Na/Pi cotransporter family protein n=3 Tax=Clostridium butyricum RepID=C4II97_CLOBU
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KJZ83875.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Na/Pi-cotransporter II-like protein
L2_040_089G1_scaffold_33_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13033..13890)
DNA (858bp) protein (286aa)
rlmA; 23S rRNA (guanine(745)-N(1))-methyltransferase RlmA (EC:2.1.1.187)
SAM-dependent methyltransferase n=4 Tax=Clostridium butyricum RepID=B1R1F7_CLOBU
Methyltransferase domain protein {ECO:0000313|EMBL:EEP55014.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_089G1_scaffold_33_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14111..16081)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9E4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36400.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_040_089G1_scaffold_33_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16308..16745)
DNA (438bp) protein (146aa)
Serine-protein kinase RsbW {ECO:0000313|EMBL:KJZ83910.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJZ83910.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Anti-sigma regulatory factor n=4 Tax=Clostridium butyricum RepID=B1R1F9_CLOBU
Anti-sigma regulatory factor (Ser/Thr protein kinase)
L2_040_089G1_scaffold_33_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16812..18908)
DNA (2097bp) protein (699aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
glycogen debranching protein GlgX (EC:3.2.1.68)
Glycogen debranching enzyme n=2 Tax=Clostridium butyricum RepID=B1R1G0_CLOBU
L2_040_089G1_scaffold_33_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18940..19245)
DNA (306bp) protein (102aa)
Anti-sigma factor antagonist n=2 Tax=Clostridium butyricum RepID=M8JJI4_CLOBU
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
anti-sigma-factor antagonist
L2_040_089G1_scaffold_33_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19754..20464)
DNA (711bp) protein (237aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1G2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83863.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_33_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20675..21220)
DNA (546bp) protein (182aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1G3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83872.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_33_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21299..22171)
DNA (873bp) protein (291aa)
Ion channel family n=3 Tax=Clostridium butyricum RepID=B1R1G4_CLOBU
Ion channel family protein {ECO:0000313|EMBL:EEP53136.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Ion channel family
L2_040_089G1_scaffold_33_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22220..23470)
DNA (1251bp) protein (417aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Tyrosine--tRNA ligase n=2 Tax=Clostridium butyricum RepID=B1R1G5_CLOBU
tyrosyl-tRNA synthetase
L2_040_089G1_scaffold_33_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24218..25156)
DNA (939bp) protein (313aa)
Periplasmic binding protein n=4 Tax=Clostridium butyricum RepID=B1R1G7_CLOBU
YclQ {ECO:0000313|EMBL:EEP54075.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_33_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25234..25989)
DNA (756bp) protein (252aa)
UPI0003D65084 related cluster n=1 Tax=unknown RepID=UPI0003D65084
Ferrichrome transport ATP-binding protein FhuC {ECO:0000313|EMBL:ETI90180.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
iron ABC transporter ATP-binding protein
L2_040_089G1_scaffold_33_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26070..27026)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9D5_CLOBU
CeuC {ECO:0000313|EMBL:EEP53154.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
fecCD transport family protein
L2_040_089G1_scaffold_33_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27016..27978)
DNA (963bp) protein (321aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium butyricum RepID=C4IIB1_CLOBU
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EEP52968.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
iron chelate uptake ABC transporter permease
L2_040_089G1_scaffold_33_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28184..28297
DNA (114bp) protein (38aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QUH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54452.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_089G1_scaffold_33_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28304..28612)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JAI0_CLOBU
No significant y {ECO:0000313|EMBL:KJZ83908.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_33_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28678..30162)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AWG0_CLOBU
Putative sodium-solute symporter {ECO:0000313|EMBL:KJZ83862.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Na+/proline symporter
L2_040_089G1_scaffold_33_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30227..31180)
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L-lactate dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z941_CLOBU
L-lactate dehydrogenase
L2_040_089G1_scaffold_33_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31435..31932)
DNA (498bp) protein (166aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QUH5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83895.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying items 1-30 of 83 in total

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