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L2_040_089G1_scaffold_36

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Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_36_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..883
DNA (882bp) protein (294aa)
Transposase, IS605 OrfB family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGH0_CLOPF
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDT26958.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
IS605 family transposase OrfB
L2_040_089G1_scaffold_36_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1042..1506
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGG9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26973.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_040_089G1_scaffold_36_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1500..2204
DNA (705bp) protein (235aa)
Glycoprotease family protein n=2 Tax=Clostridium perfringens RepID=B1RGG8_CLOPF
Glycoprotease family protein {ECO:0000313|EMBL:EDT26950.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
glycoprotease family protein
L2_040_089G1_scaffold_36_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2204..2650
DNA (447bp) protein (149aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EDT26980.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EDT26980.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGG7_CLOPF
L2_040_089G1_scaffold_36_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2744..3340)
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CYJ1_CLOPF
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_36_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3688..5850)
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81874.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_089G1_scaffold_36_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5962..7305
DNA (1344bp) protein (448aa)
Peptidase family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKC6_CLOPF
Peptidase family protein {ECO:0000313|EMBL:EDS79815.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
peptidase
L2_040_089G1_scaffold_36_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7566..8537)
DNA (972bp) protein (324aa)
peptide chain release factor 2 n=1 Tax=Clostridium perfringens RepID=UPI0000DB5E22
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_089G1_scaffold_36_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8539..8661)
DNA (123bp) protein (41aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RF2_CLOPS
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_040_089G1_scaffold_36_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8920..11442)
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=SECA_CLOPE
Protein translocase subunit SecA {ECO:0000255|HAMAP-Rule:MF_01382}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
secA; preprotein translocase subunit SecA
L2_040_089G1_scaffold_36_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11678..12217)
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_36_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12669..13328)
DNA (660bp) protein (220aa)
ComF family protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTF6_CLOPF
ComF protein, homolog {ECO:0000313|EMBL:EDT27017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
competence protein FC
L2_040_089G1_scaffold_36_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13304..14266)
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R706_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23964.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_089G1_scaffold_36_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14284..16518)
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Helicase, RecD/TraA family n=2 Tax=Clostridium perfringens RepID=Q0TND6_CLOP1
recombinase D
L2_040_089G1_scaffold_36_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16655..17791
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Clostridium perfringens RepID=B1BKB9_CLOPF
L2_040_089G1_scaffold_36_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17928..19103)
DNA (1176bp) protein (392aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
S-adenosylmethionine synthase n=9 Tax=Clostridium perfringens RepID=METK_CLOP1
L2_040_089G1_scaffold_36_17
unknown

Not on your lists

19624..20211
DNA (588bp) protein (196aa)

This feature has no annotations

L2_040_089G1_scaffold_36_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20322..20966)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R710_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23932.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_089G1_scaffold_36_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21072..21602
DNA (531bp) protein (177aa)
Putative sporulation protein YyaC n=2 Tax=Clostridium perfringens RepID=Q0TND2_CLOP1
yyaC; sporulation protein YyaC
Putative sporulation protein YyaC {ECO:0000313|EMBL:EDT23939.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_089G1_scaffold_36_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21641..22678)
DNA (1038bp) protein (346aa)
Rod shape-determining protein Mbl n=9 Tax=Clostridium perfringens RepID=H7CYK4_CLOPF
mbl; rod shape-determining protein Mbl
Mbl protein {ECO:0000313|EMBL:EDT15625.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_089G1_scaffold_36_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22739..23020)
DNA (282bp) protein (94aa)
Stage III sporulation protein D n=11 Tax=Clostridium perfringens RepID=H7CYK5_CLOPF
spoIIID; stage III sporulation protein D
Stage III sporulation protein D {ECO:0000313|EMBL:EDT15573.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_089G1_scaffold_36_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23097..23867)
DNA (771bp) protein (257aa)
Putative peptidase n=2 Tax=Clostridium perfringens RepID=Q0TNC9_CLOP1
peptidase
Putative peptidase {ECO:0000313|EMBL:EDT23991.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_089G1_scaffold_36_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23977..24999)
DNA (1023bp) protein (341aa)
Stage II sporulation protein D n=2 Tax=Clostridium perfringens RepID=Q0TNC8_CLOP1
spoIID; stage II sporulation protein D
Stage II sporulation protein D {ECO:0000313|EMBL:EDT23937.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_089G1_scaffold_36_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25111..26376)
DNA (1266bp) protein (422aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Clostridium perfringens RepID=Q0TNC7_CLOP1
L2_040_089G1_scaffold_36_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26399..27043)
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XID6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81891.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_089G1_scaffold_36_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27225..27626)
DNA (402bp) protein (134aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=9 Tax=Clostridium perfringens RepID=ATPE_CLOP1
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_36_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27642..29039)
DNA (1398bp) protein (466aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP synthase subunit beta n=10 Tax=Clostridium perfringens RepID=ATPB_CLOP1
L2_040_089G1_scaffold_36_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29053..29904)
DNA (852bp) protein (284aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=11 Tax=Clostridium perfringens RepID=ATPG_CLOP1
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_089G1_scaffold_36_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29969..31477)
DNA (1509bp) protein (503aa)
atpA; ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP synthase subunit alpha n=9 Tax=Clostridium perfringens RepID=ATPA_CLOP1
L2_040_089G1_scaffold_36_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31488..32027)
DNA (540bp) protein (180aa)
atpH; ATP synthase F0F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=7 Tax=Clostridium perfringens RepID=ATPD_CLOP1
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 81 in total

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