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L2_040_089G1_scaffold_89

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_89_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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241..2166
DNA (1926bp) protein (642aa)
Putative dimethyl sulfoxide reductase chain ynfE {ECO:0000313|EMBL:CEE04704.1}; EC=1.8.99.- {ECO:0000313|EMBL:CEE04704.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family n=4 Tax=Escherichia coli RepID=B1IR03_ECOLC
ynfE; oxidoreductase subunit
L2_040_089G1_scaffold_89_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2254..4650
DNA (2397bp) protein (799aa)
Probable dimethyl sulfoxide reductase chain YnfF n=245 Tax=Enterobacteriaceae RepID=YNFF_ECOLI
Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein {ECO:0000313|EMBL:ENA08010.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
ynfF; dimethyl sulfoxide reductase chain ynfF
L2_040_089G1_scaffold_89_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4661..5278
DNA (618bp) protein (206aa)
Probable anaerobic dimethyl sulfoxide reductase chain YnfG n=1191 Tax=Enterobacteriaceae RepID=YNFG_ECOL6
putative dimethyl sulfoxide reductase Fe-S subunit
Anaerobic dimethyl sulfoxide reductase chain B {ECO:0000313|EMBL:EOU78533.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L2_040_089G1_scaffold_89_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5280..6134
DNA (855bp) protein (285aa)
Anaerobic dimethyl sulfoxide reductase chain YnfH n=163 Tax=Escherichia RepID=YNFH_ECOLI
DMSO reductase anchor subunit DmsC
Anaerobic dimethyl sulfoxide reductase chain ynfH {ECO:0000313|EMBL:ELC08943.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_089G1_scaffold_89_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6177..6791
DNA (615bp) protein (205aa)
Tat proofreading chaperone DmsD n=797 Tax=Enterobacteriaceae RepID=DMSD_ECO57
dmsD; twin-argninine leader-binding protein for DmsA and TorA
Tat proofreading chaperone DmsD {ECO:0000256|HAMAP-Rule:MF_00940}; DMSO reductase maturation protein {ECO:0000256|HAMAP-Rule:MF_00940}; Twin-arginine leader-binding protein DmsD {ECO:0000256|HAMAP-Rule:MF_00940}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
L2_040_089G1_scaffold_89_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6986..8242
DNA (1257bp) protein (419aa)
Voltage-gated ClC-type chloride channel ClcB n=353 Tax=Enterobacteriaceae RepID=CLCB_ECO24
clcB; voltage-gated ClC-type chloride channel ClcB
Voltage-gated ClC-type chloride channel ClcB {ECO:0000256|HAMAP-Rule:MF_01203}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L2_040_089G1_scaffold_89_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8195..8890)
DNA (696bp) protein (232aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
ATP-dependent dethiobiotin synthetase BioD 2 n=701 Tax=Enterobacteriaceae RepID=BIOD2_ECO57
ynfK; putative dithiobiotin synthetase
L2_040_089G1_scaffold_89_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9015..10235)
DNA (1221bp) protein (407aa)
Protein mlc n=136 Tax=Escherichia RepID=MLC_ECOLI
ROK family protein
Protein mlc {ECO:0000313|EMBL:EZJ76656.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
L2_040_089G1_scaffold_89_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10370..11263)
DNA (894bp) protein (298aa)
Uncharacterized HTH-type transcriptional regulator YnfL n=161 Tax=Escherichia RepID=YNFL_ECOLI
hypothetical protein
Transcriptional regulator YnfL {ECO:0000313|EMBL:EOV79047.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_089G1_scaffold_89_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11370..12623
DNA (1254bp) protein (418aa)
Inner membrane transport protein YnfM n=363 Tax=Enterobacteriaceae RepID=YNFM_ECOLI
major facilitator superfamily protein
Major facilitator family transporter {ECO:0000313|EMBL:ABV20986.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
L2_040_089G1_scaffold_89_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13047..13355
DNA (309bp) protein (103aa)
Acid shock protein n=152 Tax=Escherichia RepID=ASR_ECOBW
asr; acid shock protein
Acid shock protein {ECO:0000256|HAMAP-Rule:MF_00546}; Flags: Precursor;; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_089G1_scaffold_89_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13631..14452
DNA (822bp) protein (274aa)
Uncharacterized serine protease YdgD n=150 Tax=Escherichia RepID=YDGD_ECOLI
hypothetical protein
Trypsin family protein {ECO:0000313|EMBL:KEJ68615.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L2_040_089G1_scaffold_89_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14491..14820)
DNA (330bp) protein (110aa)
Spermidine export protein MdtI n=1136 Tax=Enterobacteriaceae RepID=MDTI_ECO24
small multidrug resistance protein
Spermidine export protein MdtI {ECO:0000256|HAMAP-Rule:MF_01597, ECO:0000256|SAAS:SAAS00166084}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L2_040_089G1_scaffold_89_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14807..15172)
DNA (366bp) protein (122aa)
Spermidine export protein MdtJ n=1151 Tax=Enterobacteriaceae RepID=MDTJ_ECO24
small multidrug resistance protein
Spermidine export protein MdtJ {ECO:0000256|HAMAP-Rule:MF_01598, ECO:0000256|SAAS:SAAS00166061}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L2_040_089G1_scaffold_89_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15584..16618
DNA (1035bp) protein (345aa)
Autoinducer 2 exporter TqsA n=1 Tax=Escherichia coli 99.0741 RepID=V6FTG1_ECOLX
tqsA; putative transport protein
Pheromone autoinducer 2 transporter {ECO:0000313|EMBL:EZA28458.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L2_040_089G1_scaffold_89_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16643..18031)
DNA (1389bp) protein (463aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
NAD(P) transhydrogenase subunit beta n=1212 Tax=Bacteria RepID=PNTB_ECO57
hypothetical protein
L2_040_089G1_scaffold_89_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18042..19574)
DNA (1533bp) protein (511aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.1)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
NAD(P) transhydrogenase subunit alpha n=157 Tax=Escherichia RepID=PNTA_ECOLI
L2_040_089G1_scaffold_89_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20098..21042
DNA (945bp) protein (315aa)
Protein ydgH n=968 Tax=Enterobacteriaceae RepID=C3T982_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG56591.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L2_040_089G1_scaffold_89_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21228..22610
DNA (1383bp) protein (461aa)
Putative arginine/ornithine antiporter n=804 Tax=Bacteria RepID=ARCD_ECOL6
arginine/ornithine antiporter
Putative arginine/ornithine antiporter {ECO:0000313|EMBL:EMX39917.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_040_089G1_scaffold_89_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22647..23369
DNA (723bp) protein (241aa)
Dihydrofolate reductase FolM n=421 Tax=Enterobacteriaceae RepID=FOLM_ECO57
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:EGB69042.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
L2_040_089G1_scaffold_89_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23366..23701)
DNA (336bp) protein (112aa)
Inner membrane protein ydgC n=2 Tax=Escherichia coli RepID=L2V3I5_ECOLX
Inner membrane protein ydgC {ECO:0000313|EMBL:ESK08051.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
ydgC; inner membrane protein ydgC
L2_040_089G1_scaffold_89_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23830..24549
DNA (720bp) protein (240aa)
Response transcriptional regulatory protein RstB sensor n=8 Tax=Enterobacteriaceae RepID=C3T962_ECOLX
rstA; Response transcriptional regulatory protein
Transcriptional regulatory protein RstA {ECO:0000313|EMBL:EII46964.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L2_040_089G1_scaffold_89_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24553..25854
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
Sensor histidine protein kinase (RstA regulator) n=182 Tax=Enterobacteriaceae RepID=J7R172_ECOLX
sensor protein RstB
L2_040_089G1_scaffold_89_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25930..26859
DNA (930bp) protein (310aa)
DNA replication terminus site-binding protein n=3 Tax=Escherichia coli RepID=K3JPA1_ECOLX
DNA replication terminus site-binding protein {ECO:0000256|HAMAP-Rule:MF_00483}; Short=Ter-binding protein {ECO:0000256|HAMAP-Rule:MF_00483};; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
DNA replication terminus site-binding protein
L2_040_089G1_scaffold_89_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26856..28259)
DNA (1404bp) protein (468aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
Fumarate hydratase class II n=2 Tax=Escherichia coli RepID=K3KHF5_ECOLX
fumC; fumarate hydratase
L2_040_089G1_scaffold_89_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28402..30048)
DNA (1647bp) protein (549aa)
Fumarate hydratase n=206 Tax=Enterobacteriaceae RepID=A8A0F4_ECOHS
Fumarase A {ECO:0000313|EMBL:AIF60725.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
fumarate hydratase
L2_040_089G1_scaffold_89_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30247..31422
DNA (1176bp) protein (392aa)
Mannose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000611}; EC=5.3.1.8 {ECO:0000256|RuleBase:RU000611};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Mannose-6-phosphate isomerase n=2 Tax=Escherichia coli RepID=L2V0B4_ECOLX
manA; mannose-6-phosphate isomerase
L2_040_089G1_scaffold_89_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31523..33031
DNA (1509bp) protein (503aa)
Uncharacterized protein n=202 Tax=Enterobacteriaceae RepID=A7ZM74_ECO24
hypothetical protein
YdgA protein {ECO:0000313|EMBL:CAU97633.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L2_040_089G1_scaffold_89_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33076..34341)
DNA (1266bp) protein (422aa)
Membrane-associated protein UidC n=177 Tax=Enterobacteriaceae RepID=UIDC_ECOLI
outer membrane porin
Membrane-associated protein UidC {ECO:0000313|EMBL:EGI11222.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L2_040_089G1_scaffold_89_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34380..35753)
DNA (1374bp) protein (458aa)
Glucuronide carrier protein n=152 Tax=Enterobacteriaceae RepID=UIDB2_ECOLI
uidB; glucuronide transporter
Glucuronide carrier protein {ECO:0000313|EMBL:KGM69882.1}; Glucuronide permease uidB {ECO:0000313|EMBL:CDP71349.1}; Glucuronide transporter {ECO:0000313|EMBL:KIG75555.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 52 in total

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