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L2_040_089G1_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_135_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(545..1012)
DNA (468bp) protein (156aa)
Antioxidant, AhpC/TSA family n=3 Tax=Clostridium perfringens RepID=B1BLN7_CLOPF
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDT22405.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
AhpC/TSA family protein
L2_040_089G1_scaffold_135_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1666..2412
DNA (747bp) protein (249aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Peptidyl-prolyl cis-trans isomerase family protein n=9 Tax=Clostridium perfringens RepID=H7CS63_CLOPF
peptidyl-prolyl cis-trans isomerase
L2_040_089G1_scaffold_135_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2876..3688
DNA (813bp) protein (271aa)
ABC-2 type transporter, permease protein n=3 Tax=Clostridium perfringens RepID=B1BXQ2_CLOPF
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_089G1_scaffold_135_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3706..4878
DNA (1173bp) protein (391aa)
ABC transporter, ATP-binding protein n=9 Tax=Clostridium perfringens RepID=H7CS65_CLOPF
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIA18476.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_135_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4892..6175
DNA (1284bp) protein (428aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13525.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13525.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Teichuronic acid biosynthesis glycosyl transferase n=10 Tax=Clostridium perfringens RepID=H7CS66_CLOPF
teichuronic acid biosynthesis glycosyl transferase
L2_040_089G1_scaffold_135_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6194..7429
DNA (1236bp) protein (412aa)
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13528.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13528.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glycosyl transferase, group 1 family protein n=8 Tax=Clostridium perfringens RepID=H7CS67_CLOPF
L2_040_089G1_scaffold_135_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7443..8624
DNA (1182bp) protein (394aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridium perfringens RepID=Q0SWB1_CLOPS
teichoic acid ABC transporter ATP-binding protein
Probable ABC transporter {ECO:0000313|EMBL:BAB79979.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_089G1_scaffold_135_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8739..10172
DNA (1434bp) protein (478aa)
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTL6_CLOPF
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EIA18480.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_135_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10309..10962)
DNA (654bp) protein (218aa)
Haloacid dehalogenase, IA family protein n=2 Tax=Clostridium perfringens RepID=Q0SWA9_CLOPS
haloacid dehalogenase, IA family protein
Haloacid dehalogenase, IA family protein {ECO:0000313|EMBL:ABG85510.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_040_089G1_scaffold_135_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11045..12394)
DNA (1350bp) protein (450aa)
[Fe] hydrogenase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTL8_CLOPF
[Fe] hydrogenase
[Fe] hydrogenase {ECO:0000313|EMBL:EDT70458.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_040_089G1_scaffold_135_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12533..12679
DNA (147bp) protein (49aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS72_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25608.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_040_089G1_scaffold_135_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13096..13386
DNA (291bp) protein (97aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CS73_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18484.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_135_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13571..14869
DNA (1299bp) protein (433aa)
SagA protein n=4 Tax=Clostridium perfringens RepID=H7CS74_CLOPF
SagA protein {ECO:0000313|EMBL:EIA18485.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
SagA protein
L2_040_089G1_scaffold_135_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15043..15813
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RTM1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25610.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_040_089G1_scaffold_135_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15816..16658
DNA (843bp) protein (281aa)
tetrapyrrole methylase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal RNA small subunit methyltransferase I n=7 Tax=Clostridium perfringens RepID=H7CS77_CLOPF
L2_040_089G1_scaffold_135_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16970..17209)
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator n=6 Tax=Clostridium perfringens RepID=H7CS78_CLOPF
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:EIA18400.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_135_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17901..18500
DNA (600bp) protein (200aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XNQ0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79988.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_089G1_scaffold_135_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18537..19412)
DNA (876bp) protein (292aa)
Putative aldose 1-epimerase n=2 Tax=Clostridium perfringens RepID=B1BK11_CLOPF
Putative aldose 1-epimerase {ECO:0000313|EMBL:EDS79912.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
aldose 1-epimerase
L2_040_089G1_scaffold_135_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19523..20545)
DNA (1023bp) protein (341aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUF0_CLOP1
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB79990.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_089G1_scaffold_135_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20721..21572
DNA (852bp) protein (284aa)
YihY family protein n=3 Tax=Clostridium perfringens RepID=H7CS82_CLOPF
YihY family protein {ECO:0000313|EMBL:EIA18404.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_040_089G1_scaffold_135_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21633..22619)
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT23696.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT23696.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UDP-glucose 4-epimerase n=2 Tax=Clostridium perfringens RepID=B1R7X3_CLOPF
galE; UDP-glucose 4-epimerase
L2_040_089G1_scaffold_135_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22773..23117
DNA (345bp) protein (115aa)
Single-stranded DNA-binding protein n=11 Tax=Clostridium perfringens RepID=H7CS84_CLOPF
single-strand binding protein family
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_040_089G1_scaffold_135_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23192..24442)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CU15_CLOPF
metallo-beta-lactamase
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EDT23675.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_089G1_scaffold_135_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24895..28302)
DNA (3408bp) protein (1136aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7X6_CLOPF
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EDT23685.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
endo-beta-N-acetylglucosaminidase
L2_040_089G1_scaffold_135_25
unknown

Not on your lists

28540..28698
DNA (159bp) protein (53aa)

This feature has no annotations

L2_040_089G1_scaffold_135_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28673..28978
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS87_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18409.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_089G1_scaffold_135_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29027..29428
DNA (402bp) protein (134aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Holo-[acyl-carrier-protein] synthase n=7 Tax=Clostridium perfringens RepID=H7CS88_CLOPF
L2_040_089G1_scaffold_135_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29415..30914
DNA (1500bp) protein (500aa)
Carbohydrate kinase family protein n=2 Tax=Clostridium perfringens RepID=B1R7X9_CLOPF
Carbohydrate kinase family protein {ECO:0000313|EMBL:EDT23704.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
carbohydrate kinase
L2_040_089G1_scaffold_135_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30975..31568
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XNN9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79999.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_089G1_scaffold_135_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31814..32080
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS90_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18412.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 38 in total

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