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L2_040_089G1_scaffold_148

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_148_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(459..3974)
DNA (3516bp) protein (1172aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nifJ1; pyruvate-flavodoxin oxidoreductase NifJ (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z385_CLOBU
L2_040_089G1_scaffold_148_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4262..4855)
DNA (594bp) protein (198aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF13_CLOBU
Transglutaminase-like protein {ECO:0000313|EMBL:KJZ88345.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
leucine rich repeat protein
L2_040_089G1_scaffold_148_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5052..6974)
DNA (1923bp) protein (641aa)
fruA: PTS system fructose-specific EIIABC component (EC:2.7.1.- 2.7.1.69)
PTS system, Fru family, IIC component n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APV6_CLOBU
PTS system, Fru family, IIC component {ECO:0000313|EMBL:ENZ34122.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_089G1_scaffold_148_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7120..8025)
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
fruK; 1-phosphofructokinase FruK (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACM6_CLOBU
L2_040_089G1_scaffold_148_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8027..8770)
DNA (744bp) protein (248aa)
Lactose phosphotransferase system repressor n=2 Tax=Clostridium butyricum RepID=M8JK60_CLOBU
Transcriptional repressor of the fructose operon, DeoR family {ECO:0000313|EMBL:KJZ88338.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fruR; HTH-type transcriptional regulator FruR
L2_040_089G1_scaffold_148_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8910..9758)
DNA (849bp) protein (283aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z391_CLOBU
phosphomethylpyrimidine kinase type-1
L2_040_089G1_scaffold_148_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10023..11558)
DNA (1536bp) protein (512aa)
Polygalacturonase {ECO:0000313|EMBL:KJZ88317.1}; EC=3.2.1.15 {ECO:0000313|EMBL:KJZ88317.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2J4_CLOBU
glycoside hydrolase family protein
L2_040_089G1_scaffold_148_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11674..13182)
DNA (1509bp) protein (503aa)
Oligogalacturonide transporter n=2 Tax=Clostridium butyricum RepID=M8JB21_CLOBU
Permease of the Na:galactoside symporter family {ECO:0000313|EMBL:KJZ88320.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
major facilitator superfamily protein
L2_040_089G1_scaffold_148_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13367..13552)
DNA (186bp) protein (62aa)
Polysaccharide deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLF3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95171.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative xylanase/chitin deacetylase
L2_040_089G1_scaffold_148_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13556..14215)
DNA (660bp) protein (220aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSL4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53399.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_148_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14333..15529)
DNA (1197bp) protein (399aa)
Glycosyl hydrolase, family 88 n=4 Tax=Clostridium butyricum RepID=B1QSL5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88327.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative unsaturated glucuronyl hydrolase
L2_040_089G1_scaffold_148_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15792..16655
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2K0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34131.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
eamA-like transporter family protein
L2_040_089G1_scaffold_148_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16756..17538)
DNA (783bp) protein (261aa)
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:KJZ88344.1}; EC=1.1.1.125 {ECO:0000313|EMBL:KJZ88344.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APW9_CLOBU
2-deoxy-D-gluconate 3-dehydrogenase
L2_040_089G1_scaffold_148_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17599..19083)
DNA (1485bp) protein (495aa)
Altronate dehydratase {ECO:0000313|EMBL:KJZ88328.1}; EC=4.2.1.7 {ECO:0000313|EMBL:KJZ88328.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uxaA; altronate dehydratase UxaA (EC:4.2.1.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACP2_CLOBU
L2_040_089G1_scaffold_148_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19391..20839)
DNA (1449bp) protein (483aa)
Altronate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00670}; EC=1.1.1.58 {ECO:0000256|HAMAP-Rule:MF_00670};; Tagaturonate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00670}; Tagaturonate reductase {ECO:0000256|HAMAP-Rule:MF_00670}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uxaB; altronate oxidoreductase UxaB (EC:1.1.1.58)
Altronate oxidoreductase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMY9_CLOBU
L2_040_089G1_scaffold_148_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21033..21983)
DNA (951bp) protein (317aa)
Polygalacturonase {ECO:0000313|EMBL:KJZ95160.1}; EC=3.2.1.15 {ECO:0000313|EMBL:KJZ95160.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
kdgK; 2-dehydro-3-deoxygluconokinase KdgK (EC:2.7.1.45)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3A1_CLOBU
L2_040_089G1_scaffold_148_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21986..22630)
DNA (645bp) protein (215aa)
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KJZ88349.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KJZ88349.1};; EC=4.1.3.16 {ECO:0000313|EMBL:KJZ88349.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dgoA; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase DgoA (EC:4.1.2.21)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2K5_CLOBU
L2_040_089G1_scaffold_148_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22900..24300)
DNA (1401bp) protein (467aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uronate isomerase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APX7_CLOBU
glucuronate isomerase
L2_040_089G1_scaffold_148_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24510..25508)
DNA (999bp) protein (333aa)
Alanine racemase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLE3_CLOBU
Transcriptional regulator of the LacI family {ECO:0000313|EMBL:ETI88574.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
exuR; HTH-type transcriptional repressor ExuR
L2_040_089G1_scaffold_148_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25716..27500)
DNA (1785bp) protein (595aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yitJ: bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase (EC:2.1.1.10 1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK45_CLOBU
L2_040_089G1_scaffold_148_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27684..28880)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K6P7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54372.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
anti-sigma factor N-terminus
L2_040_089G1_scaffold_148_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28890..29579)
DNA (690bp) protein (230aa)
Sigma factor SgiI n=5 Tax=Clostridium butyricum RepID=B1R0I7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88356.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative RNA polymerase sigma factor SigI
L2_040_089G1_scaffold_148_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29915..33097)
DNA (3183bp) protein (1061aa)
ATP-dependent helicase (EC:3.6.4.-)
Non-specific serine/threonine protein kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JB09_CLOBU
SWF/SNF family helicase {ECO:0000313|EMBL:KJZ88295.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_148_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33286..33789)
DNA (504bp) protein (168aa)
Molecular chaperone, DnaJ family n=4 Tax=Clostridium butyricum RepID=B1R0I5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88351.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
heat shock protein DnaJ domain-containing protein
L2_040_089G1_scaffold_148_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33928..36378)
DNA (2451bp) protein (817aa)
recQ2; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
UPI0003D5B75A related cluster n=1 Tax=unknown RepID=UPI0003D5B75A
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ETI88580.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Displaying 25 items

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