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L2_040_089G1_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_161_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

L2_040_089G1_scaffold_161_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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180..1517
DNA (1338bp) protein (446aa)
Adenosylmethionine--8-amino-7-oxononanoate transaminase n=2 Tax=Clostridium butyricum RepID=M8JBY2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29523.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
L2_040_089G1_scaffold_161_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1538..2659
DNA (1122bp) protein (374aa)
NAD-dependent methanol dehydrogenase (Medh) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD77_CLOBU
NAD-dependent methanol dehydrogenase {ECO:0000313|EMBL:ETI91938.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
methanol dehydrogenase
L2_040_089G1_scaffold_161_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2841..3548
DNA (708bp) protein (236aa)
UPI0003D6045E related cluster n=1 Tax=unknown RepID=UPI0003D6045E
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ETI91939.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
GntR family transcriptional regulator
L2_040_089G1_scaffold_161_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3558..4556
DNA (999bp) protein (333aa)
L-asparaginase {ECO:0000313|EMBL:EEP52327.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EEP52327.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ansA; L-asparaginase 1 (EC:3.5.1.1)
L-asparaginase n=3 Tax=Clostridium butyricum RepID=B1QY64_CLOBU
L2_040_089G1_scaffold_161_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4638..5435
DNA (798bp) protein (266aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JYL5_CLOBU
CsdL protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway {ECO:0000313|EMBL:KJZ86209.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
extracellular solute-binding protein
L2_040_089G1_scaffold_161_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5504..6169
DNA (666bp) protein (222aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBY6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88924.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glnP1; glutamine transport system permease protein GlnP
L2_040_089G1_scaffold_161_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6150..6881
DNA (732bp) protein (244aa)
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD82_CLOBU
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD14901.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glnQ1; glutamine transport ATP-binding protein GlnQ
L2_040_089G1_scaffold_161_9
unknown

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comp(6728..7027)
DNA (300bp) protein (100aa)

This feature has no annotations

L2_040_089G1_scaffold_161_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7173..7970
DNA (798bp) protein (266aa)
Glutamine ABC transporter, permease/substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8J2Y1_CLOBU
Glutamine transport system permease protein glnP {ECO:0000313|EMBL:KJZ88898.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glnH1; glutamine-binding periplasmic protein GlnH
L2_040_089G1_scaffold_161_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8799..9686)
DNA (888bp) protein (296aa)
ureidoglycolate lyase (EC:4.3.2.3)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N0_CLOBU
Fumarylacetoacetase {ECO:0000313|EMBL:KHD14899.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_040_089G1_scaffold_161_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9794..10285)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
folA; dihydrofolate reductase FolA (EC:1.5.1.3)
Dihydrofolate reductase n=2 Tax=Clostridium butyricum RepID=M8JYM0_CLOBU
L2_040_089G1_scaffold_161_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10395..11186)
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thyA; thymidylate synthase ThyA (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBZ0_CLOBU
L2_040_089G1_scaffold_161_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11299..11703)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A9V2_CLOBU
Glyoxalase family protein {ECO:0000313|EMBL:ETI91948.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L2_040_089G1_scaffold_161_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11989..13656
DNA (1668bp) protein (556aa)
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=2 Tax=Clostridium butyricum RepID=M8J2Y9_CLOBU
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:ETI91949.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_040_089G1_scaffold_161_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13781..14119
DNA (339bp) protein (113aa)
Nucleoid-associated protein CBDKU1_40060 n=2 Tax=Clostridium butyricum RepID=M8K6N7_CLOBU
Nucleoid-associated protein ClosIBUN13A_CONTIG65g00717 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DNA-binding protein, YbaB/EbfC family
L2_040_089G1_scaffold_161_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14299..14895
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridium butyricum RepID=B1QY73_CLOBU
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
recR; recombination protein RecR
L2_040_089G1_scaffold_161_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15120..15398
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY74_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52376.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_161_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15422..15691
DNA (270bp) protein (90aa)
Sigma-K factor processing regulatory protein BofA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD93_CLOBU
Inhibitor of pro-sigmaK processing BofA {ECO:0000313|EMBL:KJZ88916.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
bofA; sigma-K factor processing regulatory protein BofA
L2_040_089G1_scaffold_161_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15989..17383
DNA (1395bp) protein (465aa)
Surface protective antigen SpaB n=3 Tax=Clostridium butyricum RepID=B1QY76_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29540.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
SH3 type 3 domain-containing protein
L2_040_089G1_scaffold_161_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17458..17646
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QY77_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91890.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_040_089G1_scaffold_161_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17856..18938
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Phosphoserine aminotransferase n=2 Tax=Clostridium butyricum RepID=M8JYN1_CLOBU
MFS transporter
L2_040_089G1_scaffold_161_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19432..20340
DNA (909bp) protein (303aa)
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=2 Tax=Clostridium butyricum RepID=B1QY79_CLOBU
D-isomer specific 2-hydroxyacid dehydrogenase family protein {ECO:0000313|EMBL:EEP52593.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_089G1_scaffold_161_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20571..21827
DNA (1257bp) protein (419aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY80_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86202.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_040_089G1_scaffold_161_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22130..22309
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86227.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_040_089G1_scaffold_161_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22273..24030
DNA (1758bp) protein (586aa)
5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:KJZ86188.1}; EC=3.2.2.16 {ECO:0000313|EMBL:KJZ86188.1};; EC=3.2.2.9 {ECO:0000313|EMBL:KJZ86188.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ10_CLOBU
extracellular solute-binding protein
L2_040_089G1_scaffold_161_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24109..25071
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPH8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29546.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
appB; Oligopeptide transport system permease protein AppB
L2_040_089G1_scaffold_161_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25085..25981
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABL9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29547.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport systems inner membrane component
L2_040_089G1_scaffold_161_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25993..26988
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9ZZ52_CLOBU
Oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:KJZ88865.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
appD; Oligopeptide transport ATP-binding protein AppD
L2_040_089G1_scaffold_161_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26988..27971
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8JDA2_CLOBU
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJZ88866.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
appF1; Oligopeptide transport ATP-binding protein AppF
Displaying items 1-30 of 37 in total

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