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L2_040_089G1_scaffold_176

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_176_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(475..1266)
DNA (792bp) protein (264aa)
Uncharacterized protein n=457 Tax=Enterobacteriaceae RepID=J7QD43_ECOLX
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:EIG90233.1}; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
L2_040_089G1_scaffold_176_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1276..1797)
DNA (522bp) protein (174aa)
Peptidoglycan-associated lipoprotein n=1021 Tax=Enterobacteriaceae RepID=PAL_ECO57
pal; peptidoglycan-associated lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ELE62684.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L2_040_089G1_scaffold_176_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1832..3124)
DNA (1293bp) protein (431aa)
Protein TolB n=1345 Tax=Enterobacteriaceae RepID=TOLB_ECO24
tolB; Translocation protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L2_040_089G1_scaffold_176_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3257..4522)
DNA (1266bp) protein (422aa)
Protein TolA n=425 Tax=Escherichia RepID=TOLA_ECOLI
tolA; cell envelope integrity inner membrane protein TolA
Protein TolA {ECO:0000313|EMBL:EMX01804.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
L2_040_089G1_scaffold_176_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4587..5015)
DNA (429bp) protein (143aa)
Protein TolR n=1326 Tax=Enterobacteriaceae RepID=TOLR_ECO57
colicin uptake protein TolR
Protein TolR {ECO:0000313|EMBL:EFJ71674.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L2_040_089G1_scaffold_176_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5019..5711)
DNA (693bp) protein (231aa)
Protein TolQ n=1033 Tax=Enterobacteriaceae RepID=TOLQ_ECO57
colicin uptake protein TolQ
Protein TolQ {ECO:0000313|EMBL:EGU97741.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L2_040_089G1_scaffold_176_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5708..6112)
DNA (405bp) protein (135aa)
Acyl-CoA thioester hydrolase YbgC n=1300 Tax=Enterobacteriaceae RepID=YBGC_ECO57
acyl-CoA thioester hydrolase YbgC
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:ESD68701.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
L2_040_089G1_scaffold_176_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6262..6555)
DNA (294bp) protein (98aa)
Uncharacterized protein YbgE n=1326 Tax=Enterobacteriaceae RepID=YBGE_ECO57
hypothetical protein
Cyd operon protein YbgE {ECO:0000313|EMBL:EGI47207.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_040_089G1_scaffold_176_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6555..6668)
DNA (114bp) protein (38aa)
Cytochrome bd-I ubiquinol oxidase subunit X n=1419 Tax=Enterobacteriaceae RepID=CYDX_ECOLI
ybgT; cyd operon protein YbgT
Cyd operon protein YbgT {ECO:0000313|EMBL:EFJ84752.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_040_089G1_scaffold_176_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6683..7822)
DNA (1140bp) protein (380aa)
Cytochrome d ubiquinol oxidase subunit 2 n=3 Tax=Escherichia coli RepID=L2V6H1_ECOLX
Cytochrome d ubiquinol oxidase subunit 2 {ECO:0000313|EMBL:ELC11116.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
cydB; cytochrome d ubiquinol oxidase subunit 2
L2_040_089G1_scaffold_176_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7838..9406)
DNA (1569bp) protein (523aa)
cydA; cytochrome d ubiquinol oxidase subunit 1 (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:KDY61265.1}; EC=1.10.3.- {ECO:0000313|EMBL:KDY61265.1};; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
Cytochrome bd-I ubiquinol oxidase subunit 1 n=1270 Tax=Enterobacteriaceae RepID=CYDA_ECOL6
L2_040_089G1_scaffold_176_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10143..12776)
DNA (2634bp) protein (878aa)
Alpha-mannosidase mngB {ECO:0000313|EMBL:KEN97441.1}; EC=3.2.1.- {ECO:0000313|EMBL:KEN97441.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Mannosylglycerate hydrolase n=117 Tax=Enterobacteriaceae RepID=MNGB_ECOLI
mngB; Alpha-mannosidase mngB
L2_040_089G1_scaffold_176_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12794..14710)
DNA (1917bp) protein (639aa)
PTS system, fructose-specific II ABC component n=20 Tax=Escherichia coli RepID=A7ZXZ1_ECOHS
PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC
Heat-responsive suppressor hrsA {ECO:0000313|EMBL:EOW26885.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L2_040_089G1_scaffold_176_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14879..15601
DNA (723bp) protein (241aa)
Mannosyl-D-glycerate transport/metabolism system repressor mngR n=2 Tax=Escherichia coli RepID=L2V9A7_ECOLX
Mannosyl-D-glycerate transport/metabolism system repressor mngR {ECO:0000313|EMBL:ESK11635.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
farR; DNA-binding transcriptional repressor MngR
L2_040_089G1_scaffold_176_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15705..16574)
DNA (870bp) protein (290aa)
sucD; succinate-CoA ligase, alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1324 Tax=Enterobacteriaceae RepID=SUCD_ECO57
L2_040_089G1_scaffold_176_16
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16574..17740)
DNA (1167bp) protein (389aa)
sucC; Succinyl-CoA ligase (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1331 Tax=Enterobacteriaceae RepID=SUCC_ECO24
L2_040_089G1_scaffold_176_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18106..19323)
DNA (1218bp) protein (406aa)
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex n=744 Tax=Enterobacteriaceae RepID=ODO2_ECO57
L2_040_089G1_scaffold_176_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19338..22139)
DNA (2802bp) protein (934aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1176 Tax=Enterobacteriaceae RepID=ODO1_ECO57
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EQY33676.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_040_089G1_scaffold_176_19
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22340..23056)
DNA (717bp) protein (239aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinate dehydrogenase n=1180 Tax=Enterobacteriaceae RepID=C3TIN2_ECOLX
L2_040_089G1_scaffold_176_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23072..24838)
DNA (1767bp) protein (589aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
Succinate dehydrogenase flavoprotein subunit n=1198 Tax=Enterobacteriaceae RepID=DHSA_ECO57
L2_040_089G1_scaffold_176_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24838..25185)
DNA (348bp) protein (116aa)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=1105 Tax=Enterobacteriaceae RepID=DHSD_ECOL6
sdhD; succinate dehydrogenase cytochrome b556 small subunit
Succinate dehydrogenase hydrophobic membrane anchor subunit {ECO:0000313|EMBL:EOV80348.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_040_089G1_scaffold_176_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25179..25583)
DNA (405bp) protein (135aa)
Succinate dehydrogenase cytochrome b556 subunit n=1 Tax=Escherichia coli HVH 79 (4-2512823) RepID=T6JUF6_ECOLX
sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EFK26077.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
L2_040_089G1_scaffold_176_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25964..26071
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Escherichia coli O81 (strain ED1a) RepID=B7MPL4_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN32150.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_040_089G1_scaffold_176_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26277..27560
DNA (1284bp) protein (428aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase n=1084 Tax=Enterobacteriaceae RepID=CISY_ECOL6
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L2_040_089G1_scaffold_176_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27949..28515
DNA (567bp) protein (189aa)
Fimbrial protein n=329 Tax=Enterobacteriaceae RepID=B1IY10_ECOLC
fimbrial protein
Fimbrial protein {ECO:0000313|EMBL:EFK45604.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
L2_040_089G1_scaffold_176_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28575..31025
DNA (2451bp) protein (817aa)
Outer membrane protein n=2 Tax=Escherichia coli RepID=L2V9K0_ECOLX
Outer membrane protein {ECO:0000313|EMBL:ESK11623.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
fimbrial usher family protein
L2_040_089G1_scaffold_176_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31040..31771
DNA (732bp) protein (244aa)
Pili assembly chaperone n=11 Tax=Escherichia coli RepID=B1IY12_ECOLC
pili assembly chaperone
Assembly protein {ECO:0000313|EMBL:EOV81790.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_089G1_scaffold_176_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31768..32829
DNA (1062bp) protein (354aa)
Uncharacterized protein n=227 Tax=Enterobacteriaceae RepID=J7QD23_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD28415.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_040_089G1_scaffold_176_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32981..34027
DNA (1047bp) protein (349aa)
Protein AbrB n=316 Tax=Enterobacteriaceae RepID=A7ZXX6_ECOHS
membrane protein AbrB duplication
Membrane AbrB duplication domain protein {ECO:0000313|EMBL:KEO03396.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L2_040_089G1_scaffold_176_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34024..34815)
DNA (792bp) protein (264aa)
nei; endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.-.-)
Endonuclease 8 n=63 Tax=Escherichia RepID=END8_ECOHS
Endonuclease 8 {ECO:0000256|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000256|HAMAP-Rule:MF_01253}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
Displaying items 1-30 of 38 in total

View Taxonomy