ggKbase home page

L2_040_089G1_scaffold_180

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_180_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

329..436
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Escherichia coli cloneA_i1 RepID=G5KU37_ECOLX
ldrD3; toxic polypeptide, small
Small toxic polypeptide ldrD {ECO:0000313|EMBL:KDV40847.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_040_089G1_scaffold_180_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(484..2166)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Escherichia coli 2733950 RepID=N3JEX0_ECOLX
yhjU; putative inner membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDX84160.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L2_040_089G1_scaffold_180_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2163..2354)
DNA (192bp) protein (64aa)
Protein BcsF homolog n=1329 Tax=Enterobacteriaceae RepID=BCSF_ECOL6
cellulose biosynthesis protein BcsF
Celllulose biosynthesis operon protein BcsF/YhjT {ECO:0000313|EMBL:EHP63847.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L2_040_089G1_scaffold_180_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2351..3910)
DNA (1560bp) protein (520aa)
Cellulose biosynthesis protein BcsE n=259 Tax=Escherichia RepID=C6EEE7_ECOBD
bcsE; cellulose biosynthesis protein BcsE
Cellulose biosynthesis protein BcsE {ECO:0000313|EMBL:KDU29536.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L2_040_089G1_scaffold_180_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4195..4383
DNA (189bp) protein (63aa)
Uncharacterized protein YhjR n=596 Tax=Enterobacteriaceae RepID=YHJR_ECOLI
yhjR; hypothetical protein
PF10945 family protein {ECO:0000313|EMBL:EII44241.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L2_040_089G1_scaffold_180_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4395..5147
DNA (753bp) protein (251aa)
Cellulose synthase operon protein YhjQ n=41 Tax=Escherichia coli RepID=B1J099_ECOLC
cell division protein
Cellulose synthase operon protein YhjQ {ECO:0000313|EMBL:ENB09061.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
L2_040_089G1_scaffold_180_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5144..7762
DNA (2619bp) protein (873aa)
bcsA; cellulose synthase catalytic subunit (EC:2.4.1.12)
Cellulose synthase catalytic subunit [UDP-forming] n=2 Tax=Escherichia coli RepID=L2VE27_ECOLX
Cellulose synthase catalytic subunit [UDP-forming] {ECO:0000313|EMBL:ELC13751.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_089G1_scaffold_180_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7809..10112
DNA (2304bp) protein (768aa)
Cyclic di-GMP-binding protein (Cellulose synthase regulator subunit B) n=1 Tax=Escherichia coli O78:H11 (strain H10407 / ETEC) RepID=E3PMC2_ECOH1
cyclic di-GMP-binding protein (cellulose synthase regulator subunit B)
Cellulose synthase subunit B {ECO:0000313|EMBL:ACT27283.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L2_040_089G1_scaffold_180_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10119..11225
DNA (1107bp) protein (369aa)
Glucanase {ECO:0000256|RuleBase:RU361167}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361167};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Cellulase n=48 Tax=Escherichia RepID=B1J0A2_ECOLC
yhjM; Cellulase precursor
L2_040_089G1_scaffold_180_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11207..14680
DNA (3474bp) protein (1158aa)
Cellulose synthase operon protein C n=2 Tax=Escherichia coli RepID=L2VET0_ECOLX
Cellulose synthase operon protein C {ECO:0000313|EMBL:ESK17267.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
bcsC; Cellulose synthase operon C domain protein precursor
L2_040_089G1_scaffold_180_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14801..16750
DNA (1950bp) protein (650aa)
Protein YhjK n=105 Tax=Escherichia RepID=YHJK_ECOLI
yhjK; diguanylate cyclase
Diguanylate cyclase/phosphodiesterase with extracellular sensor {ECO:0000313|EMBL:ACT27286.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L2_040_089G1_scaffold_180_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16933..18219
DNA (1287bp) protein (429aa)
C4-dicarboxylate transport protein n=1124 Tax=Enterobacteriaceae RepID=DCTA_ECO24
sodium:dicarboxylate symporter
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L2_040_089G1_scaffold_180_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18440..19936
DNA (1497bp) protein (499aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EFJ67836.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFJ67836.1};; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 175-1.;"
Protein YhjJ n=142 Tax=Escherichia RepID=YHJJ_ECOLI
putative protease
L2_040_089G1_scaffold_180_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20032..20961)
DNA (930bp) protein (310aa)
2-dehydro-3-deoxygluconokinase n=180 Tax=Escherichia RepID=KDGK_ECOLI
PfkB domain-containing protein
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDZ17832.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L2_040_089G1_scaffold_180_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21193..21960
DNA (768bp) protein (256aa)
Cyclic di-GMP phosphodiesterase YhjH n=420 Tax=Enterobacteriaceae RepID=YHJH_ECOLI
EAL domain-containing protein
Diguanylate phosphodiesterase {ECO:0000313|EMBL:EKJ80970.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_040_089G1_scaffold_180_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22030..24090
DNA (2061bp) protein (687aa)
Uncharacterized protein YhjG n=291 Tax=Enterobacteriaceae RepID=YHJG_ECOLI
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:ESD73020.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_040_089G1_scaffold_180_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24272..25594)
DNA (1323bp) protein (441aa)
Inner membrane metabolite transport protein YhjE n=545 Tax=Enterobacteriaceae RepID=YHJE_ECOLI
inner membrane metabolite transport protein yhjE
Inner membrane metabolite transport protein yhjE {ECO:0000313|EMBL:EGP23145.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L2_040_089G1_scaffold_180_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26005..27018)
DNA (1014bp) protein (338aa)
Inner membrane protein YhjD n=166 Tax=Escherichia RepID=YHJD_ECOLI
hypothetical protein
Inner membrane protein YhjD {ECO:0000313|EMBL:ENB25319.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L2_040_089G1_scaffold_180_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27067..28038)
DNA (972bp) protein (324aa)
Transcriptional regulator, LysR family n=15 Tax=Escherichia coli RepID=B1J0B2_ECOLC
yhjC; LysR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ELC13739.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_089G1_scaffold_180_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28486..29088
DNA (603bp) protein (201aa)
Putative HTH-type transcriptional regulator YhjB n=528 Tax=Enterobacteriaceae RepID=YHJB_ECOLI
two component LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ESD73016.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_040_089G1_scaffold_180_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29139..30788)
DNA (1650bp) protein (550aa)
treF; trehalase (EC:3.2.1.28)
Cytoplasmic trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; EC=3.2.1.28 {ECO:0000256|HAMAP-Rule:MF_01059};; Alpha,alpha-trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; Alpha,alpha-trehalose glucohydrolase {ECO:0000256|HAMAP-Rule:MF_01059}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
Cytoplasmic trehalase n=344 Tax=Enterobacteriaceae RepID=TREF_ECO24
L2_040_089G1_scaffold_180_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31193..32590
DNA (1398bp) protein (466aa)
Di-haem cytochrome c peroxidase family protein n=65 Tax=Enterobacteriaceae RepID=A8A5X8_ECOHS
cytochrome C peroxidase
Cytochrome c family protein {ECO:0000313|EMBL:EMX82483.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L2_040_089G1_scaffold_180_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32801..33142
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Escherichia coli 7.1982 RepID=L9HA15_ECOLX
gadA; glutamate decarboxylase
Glutamate decarboxylase A subunit {ECO:0000313|EMBL:EHU04650.1}; Flags: Fragment;; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
Displaying 23 items

View Taxonomy