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L2_040_089G1_scaffold_227

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_227_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7H6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_227_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

424..1479
DNA (1056bp) protein (352aa)
D-galactose-binding periplasmic protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKW8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33268.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mglB1; D-galactose-binding periplasmic protein MglB
L2_040_089G1_scaffold_227_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1640..2662
DNA (1023bp) protein (341aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
lyc; autolytic lysozyme Lyc (EC:3.2.1.17)
Glycoside hydrolase, family 25 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM83_CLOBU
L2_040_089G1_scaffold_227_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2939..6268
DNA (3330bp) protein (1110aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z050_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33266.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_040_089G1_scaffold_227_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6478..6810
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53104.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_227_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7407..8627
DNA (1221bp) protein (407aa)
fliB; flagellin lysine-N-methylase FliB (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA41_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33263.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_089G1_scaffold_227_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8718..9281
DNA (564bp) protein (188aa)
Putative accessory protein regulator protein B n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM92_CLOBU
Accessory regulator B superfamily {ECO:0000313|EMBL:KJZ85334.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
accessory gene regulator B
L2_040_089G1_scaffold_227_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9401..10069
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JBU4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_227_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10135..11967)
DNA (1833bp) protein (611aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
1,4-alpha-glucan branching enzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0R0_CLOBU
Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein
L2_040_089G1_scaffold_227_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12589..12828
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7I7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83701.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_227_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13027..13896
DNA (870bp) protein (290aa)
Radical SAM domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKX9_CLOBU
Molybdenum cofactor biosynthesis enzyme {ECO:0000313|EMBL:KJZ83679.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
radical SAM domain protein
L2_040_089G1_scaffold_227_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13985..14575
DNA (591bp) protein (197aa)
Rubrerythrin n=3 Tax=Clostridium butyricum RepID=B1QXS9_CLOBU
Rubrerythrin {ECO:0000313|EMBL:KJZ83694.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rbr; rubrerythrin
L2_040_089G1_scaffold_227_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14682..15260
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXT0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83692.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_227_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15454..16056
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=4 Tax=Clostridium butyricum RepID=B1QXT1_CLOBU
L2_040_089G1_scaffold_227_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16205..17248
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Clostridium butyricum RepID=B1QXT2_CLOBU
ruvB; Holliday junction DNA helicase RuvB
L2_040_089G1_scaffold_227_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17406..18431
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Clostridium butyricum RepID=M8JKY6_CLOBU
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L2_040_089G1_scaffold_227_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18625..19761
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QXT4_CLOBU
L2_040_089G1_scaffold_227_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20031..20315
DNA (285bp) protein (95aa)
Preprotein translocase, YajC subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBV3_CLOBU
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KJZ83700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
preprotein translocase, YajC subunit
L2_040_089G1_scaffold_227_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20473..20847
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXT6_CLOBU
Membrane protein {ECO:0000313|EMBL:EEP53482.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
membrane protein
L2_040_089G1_scaffold_227_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21222..22481
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=3 Tax=Clostridium butyricum RepID=C4IKT8_CLOBU
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
secD; protein translocase subunit SecD
L2_040_089G1_scaffold_227_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22474..23343
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKZ2_CLOBU
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
secF; protein translocase subunit SecF
L2_040_089G1_scaffold_227_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23474..24352
DNA (879bp) protein (293aa)
recJ1; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Phosphoesterase, RecJ domain protein n=2 Tax=Clostridium butyricum RepID=C4IKU0_CLOBU
Phosphoesterase, RecJ domain protein {ECO:0000313|EMBL:EEP53743.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_089G1_scaffold_227_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24479..24997
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
apt; adenine phosphoribosyltransferase Apt (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTX4_CLOBU
L2_040_089G1_scaffold_227_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25182..27395
DNA (2214bp) protein (738aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:KJZ83633.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJZ83633.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Clostridium butyricum RepID=C4IKU2_CLOBU
L2_040_089G1_scaffold_227_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27461..27910
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Clostridium butyricum RepID=B1R2Q3_CLOBU
L2_040_089G1_scaffold_227_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28013..28414
DNA (402bp) protein (134aa)
Metallo-beta-lactamase family protein n=4 Tax=Clostridium butyricum RepID=B1R2Q4_CLOBU
Beta-lactamase domain protein {ECO:0000313|EMBL:KJZ83686.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
metallo-beta-lactamase family protein
L2_040_089G1_scaffold_227_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28728..30155
DNA (1428bp) protein (476aa)
hemZ; oxygen-independent coproporphyrinogen-III oxidase 2 (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMC7_CLOBU
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:ENZ33242.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_089G1_scaffold_227_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


30295..31554
DNA (1260bp) protein (420aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBW4_CLOBU
L2_040_089G1_scaffold_227_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31775..33574
DNA (1800bp) protein (600aa)
aspS1; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartate--tRNA ligase n=4 Tax=Clostridium butyricum RepID=B1R2Q7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93027.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Displaying 29 items

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