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L2_040_089G1_scaffold_228

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_228_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(59..2494)
DNA (2436bp) protein (812aa)
Protein rhsD n=2 Tax=Escherichia coli RepID=L2V550_ECOLX
Protein rhsD {ECO:0000313|EMBL:ELC09525.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
rhsW5; Type I RHS protein
L2_040_089G1_scaffold_228_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2562..4670)
DNA (2109bp) protein (703aa)
Type VI secretion system Vgr family protein n=2 Tax=Escherichia coli RepID=L2V3U1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK09893.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
ImpA family type VI secretion-associated protein
L2_040_089G1_scaffold_228_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5780..6397)
DNA (618bp) protein (206aa)
GST-like protein n=2 Tax=Escherichia coli RepID=L2V2M8_ECOLX
GST-like protein {ECO:0000313|EMBL:ELC09523.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
transferase-like protein
L2_040_089G1_scaffold_228_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6663..8162
DNA (1500bp) protein (500aa)
Amino acid permease-associated region n=181 Tax=Enterobacteriaceae RepID=B1IS06_ECOLC
ansP; L-asparagine transporter AnsP
Putative proline-specific permease ProY {ECO:0000313|EMBL:EGJ05074.1}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
L2_040_089G1_scaffold_228_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8277..9338)
DNA (1062bp) protein (354aa)
40-residue YVTN family beta-propeller n=2 Tax=Escherichia coli RepID=L2V1W7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK09890.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
yncE; hypothetical protein
L2_040_089G1_scaffold_228_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9580..11682
DNA (2103bp) protein (701aa)
TonB-dependent siderophore receptor n=2 Tax=Escherichia coli RepID=L2V546_ECOLX
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ELC09520.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
putative iron outer membrane receptor
L2_040_089G1_scaffold_228_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11718..12383)
DNA (666bp) protein (222aa)
HTH-type transcriptional regulator mcbR n=13 Tax=Escherichia coli RepID=M8M4F9_ECOLX
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:KGM58945.1}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli G3/10.;"
GntR family transcriptional regulator
L2_040_089G1_scaffold_228_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12581..13618)
DNA (1038bp) protein (346aa)
Oxidoreductase, Zn-dependent and NAD(P)-binding n=2 Tax=Escherichia coli RepID=L2V4T0_ECOLX
Oxidoreductase, Zn-dependent and NAD(P)-binding {ECO:0000313|EMBL:ELC09517.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
putative oxidoreductase
L2_040_089G1_scaffold_228_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13799..14317
DNA (519bp) protein (173aa)
Acetyltransferase, GNAT family n=10 Tax=Escherichia coli RepID=A8A008_ECOHS
N-acetyltransferase GCN5
Acetyltransferase family protein {ECO:0000313|EMBL:EMX40918.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_040_089G1_scaffold_228_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14314..14763
DNA (450bp) protein (150aa)
Inner membrane protein YdcZ n=513 Tax=Enterobacteriaceae RepID=YDCZ_ECOLI
hypothetical protein
Inner membrane protein ydcZ {ECO:0000313|EMBL:KDZ35392.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L2_040_089G1_scaffold_228_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14764..14997)
DNA (234bp) protein (78aa)
Uncharacterized protein YdcY n=1340 Tax=cellular organisms RepID=YDCY_ECO57
hypothetical protein
PF10735 family protein {ECO:0000313|EMBL:EIG83921.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_040_089G1_scaffold_228_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15083..15256)
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=V6EIK9_ECOLX
ydcX; putative inner membrane protein
Membrane protein {ECO:0000313|EMBL:EZE29364.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L2_040_089G1_scaffold_228_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15643..17067)
DNA (1425bp) protein (475aa)
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; EC=1.2.1.19 {ECO:0000256|HAMAP-Rule:MF_01275};; 1-pyrroline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; 4-aminobutanal dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Gamma-aminobutyraldehyde dehydrogenase n=2 Tax=Escherichia coli RepID=L2V4S5_ECOLX
ydcW; 1-pyrroline dehydrogenase YdcW
L2_040_089G1_scaffold_228_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17089..17883)
DNA (795bp) protein (265aa)
Inner membrane ABC transporter permease protein YdcV n=372 Tax=Enterobacteriaceae RepID=YDCV_ECOLI
ydcV; ABC transporter permease
Inner membrane ABC transporter permease protein ydcV {ECO:0000313|EMBL:KEN99491.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_089G1_scaffold_228_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17873..18814)
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=141 Tax=Escherichia RepID=A8A000_ECOHS
binding-protein-dependent transport system inner membrane protein
Inner membrane transport system {ECO:0000313|EMBL:EGB68822.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
L2_040_089G1_scaffold_228_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18815..19828)
DNA (1014bp) protein (338aa)
Spermidine/putrescine transporter subunit n=2 Tax=Escherichia coli RepID=L2V3S7_ECOLX
Spermidine/putrescine transporter subunit {ECO:0000313|EMBL:ELC09509.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ABC transporter ATP-binding protein
L2_040_089G1_scaffold_228_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19846..20991)
DNA (1146bp) protein (382aa)
Putative ABC transporter periplasmic-binding protein YdcS n=187 Tax=Enterobacteriaceae RepID=YDCS_ECOLI
extracellular solute-binding protein family 1
Spermidine/putrescine transporter subunit {ECO:0000313|EMBL:EQY25049.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_040_089G1_scaffold_228_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21236..22642)
DNA (1407bp) protein (469aa)
Uncharacterized HTH-type transcriptional regulator YdcR n=133 Tax=Escherichia RepID=YDCR_ECOLI
GntR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDX47166.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
L2_040_089G1_scaffold_228_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22721..23158)
DNA (438bp) protein (146aa)
Antitoxin HicB n=1 Tax=Escherichia coli 179100 RepID=N3IWJ9_ECOLX
DNA-binding transcriptional regulator
Antitoxin HicB {ECO:0000313|EMBL:KDY57318.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_040_089G1_scaffold_228_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23183..23359)
DNA (177bp) protein (59aa)
Probable mRNA interferase HicA n=150 Tax=Escherichia RepID=HICA_ECO57
hicA; mRNA interferase toxin of the HicAB toxin-antitoxin system
mRNA interferase {ECO:0000313|EMBL:KIG78962.1}; mRNA interferase toxin of the HicAB toxin-antitoxin system {ECO:0000313|EMBL:AKF55321.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_040_089G1_scaffold_228_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23641..23811
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0002B8D52C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD65301.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_040_089G1_scaffold_228_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23903..25864)
DNA (1962bp) protein (654aa)
Protease n=7 Tax=Escherichia coli RepID=L2V2K9_ECOLX
Protease {ECO:0000313|EMBL:EQY62621.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
hypothetical protein
L2_040_089G1_scaffold_228_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25937..26473)
DNA (537bp) protein (179aa)
Helix-turn-helix DNA-binding/cupin domain protein n=13 Tax=Escherichia coli RepID=B2NDL1_ECOLX
Helix-turn-helix family protein {ECO:0000313|EMBL:EMX05844.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
ydcN; putative DNA-binding transcriptional regulator
L2_040_089G1_scaffold_228_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26565..27740
DNA (1176bp) protein (392aa)
Benzoate transporter n=10 Tax=Enterobacteriaceae RepID=B2NDL0_ECOLX
Inner membrane protein ydcO {ECO:0000313|EMBL:ELC09501.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
membrane protein
L2_040_089G1_scaffold_228_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27780..28196)
DNA (417bp) protein (139aa)
IS605 OrfB family transposase n=1 Tax=Escherichia coli UMEA 3124-1 RepID=T8T4H6_ECOLX
putative IS609 transposase TnpB
IS605 OrfB family transposase {ECO:0000313|EMBL:EOW08065.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
Displaying 25 items

View Taxonomy