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L2_040_089G1_scaffold_254

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_254_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1839
DNA (1839bp) protein (613aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DNA gyrase subunit A n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHE5_CLOBU
DNA topoisomerase IV subunit A
L2_040_089G1_scaffold_254_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2036..2590
DNA (555bp) protein (185aa)
DJ-1 family protein n=2 Tax=Clostridium butyricum RepID=M8JG16_CLOBU
DJ-1 family protein {ECO:0000313|EMBL:ENZ31507.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DJ-1 family protein
L2_040_089G1_scaffold_254_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2654..4420
DNA (1767bp) protein (589aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:KJZ87557.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJZ87557.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
recJ2; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2P7_CLOBU
L2_040_089G1_scaffold_254_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4840..5913
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAV3_CLOBU
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
L2_040_089G1_scaffold_254_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6066..6491
DNA (426bp) protein (142aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J733_CLOBU
Flavodoxin {ECO:0000313|EMBL:ENZ31504.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative flavoprotein
L2_040_089G1_scaffold_254_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6707..10216
DNA (3510bp) protein (1170aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
nifJ2; pyruvate-flavodoxin oxidoreductase NifJ (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=5 Tax=Clostridium butyricum RepID=A7LNI7_CLOBU
L2_040_089G1_scaffold_254_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10526..10873
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXC2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87586.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_254_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11320..12513
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=2 Tax=Clostridium butyricum RepID=M8K2P2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31501.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
class I and II aminotransferase
L2_040_089G1_scaffold_254_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12685..13329
DNA (645bp) protein (215aa)
HAD hydrolase, family IB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YVN6_CLOBU
HAD hydrolase, family IB {ECO:0000313|EMBL:ENZ31500.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HAD-superfamily subfamily IB hydrolase
L2_040_089G1_scaffold_254_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13517..14242
DNA (726bp) protein (242aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KJZ87561.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KJZ87561.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Aminotransferase, class IV n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J728_CLOBU
aminotransferase class IV
L2_040_089G1_scaffold_254_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14343..16280
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHD4_CLOBU
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:KJZ87546.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_254_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16294..16743
DNA (450bp) protein (150aa)
UPI0003D65DD8 related cluster n=1 Tax=unknown RepID=UPI0003D65DD8
Positive regulator of CheA protein activity (CheW) {ECO:0000313|EMBL:KJZ87572.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cheW; chemotaxis protein chew
L2_040_089G1_scaffold_254_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16753..17241
DNA (489bp) protein (163aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cheD2; putative chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=2 Tax=Clostridium butyricum RepID=M8K2N6_CLOBU
L2_040_089G1_scaffold_254_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17254..18402
DNA (1149bp) protein (383aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAU3_CLOBU
response regulator receiver modulated CheB methylesterase
L2_040_089G1_scaffold_254_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18412..19179
DNA (768bp) protein (256aa)
Chemotaxis protein methyltransferase, CheR n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J723_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31494.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
protein-glutamate O-methyltransferase
L2_040_089G1_scaffold_254_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19213..21267
DNA (2055bp) protein (685aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cheA5; chemotaxis protein CheA (EC:2.7.13.3)
Chemotaxis protein CheA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHC9_CLOBU
L2_040_089G1_scaffold_254_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21468..22067
DNA (600bp) protein (200aa)
cheC; CheY-P phosphatase CheC (EC:3.-.-.-)
Chemotaxis protein CheC n=2 Tax=Clostridium butyricum RepID=M8JG02_CLOBU
Chemotaxis protein CheC--inhibitor of MCP methylation {ECO:0000313|EMBL:KJZ87577.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_254_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22083..22442
DNA (360bp) protein (120aa)
Sporulation initiation phosphotransferase F n=4 Tax=Clostridium butyricum RepID=B1QXB1_CLOBU
Flagellar hook-associated protein FliD {ECO:0000313|EMBL:KJZ97638.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cheY6; chemotaxis protein CheY
L2_040_089G1_scaffold_254_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22567..22971
DNA (405bp) protein (135aa)
UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase {ECO:0000313|EMBL:KJZ97640.1}; EC=2.3.1.191 {ECO:0000313|EMBL:KJZ97640.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Chemotaxis signal transduction protein CheW n=3 Tax=Clostridium butyricum RepID=M8KAT8_CLOBU
chemotaxis signal transduction protein
L2_040_089G1_scaffold_254_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22990..23988
DNA (999bp) protein (333aa)
Flagellar motor switch protein FliM n=2 Tax=Clostridium butyricum RepID=M8J719_CLOBU
Flagellar motor switch protein FliM {ECO:0000313|EMBL:KJZ87573.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fliM; flagellar motor switch protein FliM
L2_040_089G1_scaffold_254_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23972..25258
DNA (1287bp) protein (429aa)
Flagellar motor switch protein FliN n=2 Tax=Clostridium butyricum RepID=R0A4S9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ82782.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
flagellar motor switch protein
Displaying 21 items

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