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L2_040_089G1_scaffold_306

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_306_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..279)
DNA (279bp) protein (93aa)
Alpha-L-arabinofuranosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAB4_9CLOT
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:KHD16494.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
alpha-L-arabinofuranosidase
L2_040_089G1_scaffold_306_2
unknown

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569..667
DNA (99bp) protein (33aa)

This feature has no annotations

L2_040_089G1_scaffold_306_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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726..1439
DNA (714bp) protein (238aa)
Putative transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5Q2_9CLOT
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD16493.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
regulatory protein ArsR
L2_040_089G1_scaffold_306_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1501..2958)
DNA (1458bp) protein (486aa)
Arabinan endo-1,5-alpha-L-arabinosidase n=2 Tax=Bacillus atrophaeus RepID=E3E0Z1_BACA1
Uncharacterized protein {ECO:0000313|EMBL:KHD16536.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
arabinan endo-1,5-alpha-L-arabinosidase
L2_040_089G1_scaffold_306_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3106..5316)
DNA (2211bp) protein (737aa)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Bacillus subtilis subsp. spizizenii (strain TU-B-10) RepID=G4P1L4_BACPT
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KHD13435.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
acetyl-CoA carboxylase, biotin carboxylase
L2_040_089G1_scaffold_306_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5522..6415
DNA (894bp) protein (298aa)
AraC family transcriptional regulator n=1 Tax=Clostridium termitidis CT1112 RepID=S0FST1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHD13434.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
AraC family transcriptional regulator
L2_040_089G1_scaffold_306_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6496..7641)
DNA (1146bp) protein (382aa)
YibE/F family protein n=3 Tax=Clostridium butyricum RepID=M8JCD2_CLOBU
Membrane protein {ECO:0000313|EMBL:KHD16490.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YibE/F family protein
L2_040_089G1_scaffold_306_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7658..9217)
DNA (1560bp) protein (520aa)
Alkaline phosphatase {ECO:0000313|EMBL:KJZ83740.1}; EC=3.1.3.1 {ECO:0000313|EMBL:KJZ83740.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT4_CLOBU
L2_040_089G1_scaffold_306_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9437..10129)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLI5_CLOBU
Putative HD superfamily hydrolase {ECO:0000313|EMBL:KJZ83752.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_306_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10416..11357)
DNA (942bp) protein (314aa)
glucokinase (EC:2.7.1.2)
Glucose kinase n=3 Tax=Clostridium butyricum RepID=B1QWD5_CLOBU
Putative glucokinase {ECO:0000313|EMBL:EEP54205.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_089G1_scaffold_306_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11844..12371
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWD4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83736.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA-binding region-containing protein (RNP-1)
L2_040_089G1_scaffold_306_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12534..13895
DNA (1362bp) protein (454aa)
Radical SAM domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCC9_CLOBU
Radical SAM domain protein {ECO:0000313|EMBL:EEP53077.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
radical SAM
L2_040_089G1_scaffold_306_13
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13898..14638
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT2_CLOBU
Domain often clustered or fused with uracil-DNA glycosylase {ECO:0000313|EMBL:KJZ91099.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_040_089G1_scaffold_306_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14757..16469)
DNA (1713bp) protein (571aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLI1_CLOBU
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EEP54504.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyl-accepting chemotaxis sensory transducer
L2_040_089G1_scaffold_306_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16778..17605)
DNA (828bp) protein (276aa)
L-arabinose transport system permease protein AraQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K823_CLOBU
N-Acetyl-D-glucosamine ABC transport system, permease protein 2 {ECO:0000313|EMBL:KJZ83758.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter permease
L2_040_089G1_scaffold_306_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17625..18557)
DNA (933bp) protein (311aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGA5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83965.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC transporter permease
L2_040_089G1_scaffold_306_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18647..19924)
DNA (1278bp) protein (426aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCC5_CLOBU
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein {ECO:0000313|EMBL:KJZ83749.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter substrate-binding protein
L2_040_089G1_scaffold_306_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20184..22376)
DNA (2193bp) protein (731aa)
agaR; alpha-galactosidase 1 (EC:3.2.1.22)
Alpha-galactosidase AgaN n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMS7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83742.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_306_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22563..23432
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLH5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83731.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
msmR1; Msm operon regulatory protein MsmR
Displaying 19 items

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