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L2_040_089G1_scaffold_313

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_313_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..124
DNA (123bp) protein (41aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171, ECO:0000313|EMBL:CKG97418.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Glutamate decarboxylase alpha domain protein (Fragment) n=1 Tax=Escherichia coli P0304816.4 RepID=N4RF35_ECOLX
gadA; glutamate decarboxylase
L2_040_089G1_scaffold_313_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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280..1815
DNA (1536bp) protein (512aa)
Probable glutamate/gamma-aminobutyrate antiporter n=524 Tax=Enterobacteriaceae RepID=GADC_ECOLI
gadC; glutamate:g-aminobutyrate antiporter protein GadC
Gamma-aminobutyrate antiporter {ECO:0000313|EMBL:KEN91026.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_040_089G1_scaffold_313_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1946..3265
DNA (1320bp) protein (440aa)
Predicted liprotein n=25 Tax=Enterobacteriaceae RepID=E0J6D0_ECOLW
yddW; liprotein
Lipoprotein {ECO:0000313|EMBL:ERA02672.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L2_040_089G1_scaffold_313_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3642..5024
DNA (1383bp) protein (461aa)
Diguanylate cyclase DosC n=6 Tax=Enterobacteriaceae RepID=L2V199_ECOLX
Diguanylate cyclase yddV {ECO:0000313|EMBL:ERA02671.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
diguanylate cyclase
L2_040_089G1_scaffold_313_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5049..5354
DNA (306bp) protein (102aa)
dos; heme-regulated cyclic AMP phosphodiesterase (direct oxygen sensor protein) (EC:3.1.4.-)
Heme-regulated cyclic AMP phosphodiesterase n=3 Tax=Escherichia coli RepID=B1LFC7_ECOSM
C-di-GMP phosphodiesterase {ECO:0000313|EMBL:EZE30541.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L2_040_089G1_scaffold_313_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5376..7448
DNA (2073bp) protein (691aa)
dos; c-di-GMP phosphodiesterase, heme-regulated, subunit of DosC-DosP complex (EC:2.7.7.65 3.1.4.52)
cAMP phosphodiesterase n=6 Tax=Escherichia coli RepID=D6IAI7_ECOLX
Oxygen sensor protein DosP {ECO:0000313|EMBL:ESK09392.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L2_040_089G1_scaffold_313_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7735..8316
DNA (582bp) protein (194aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
D-alanyl-D-alanine dipeptidase n=2 Tax=Escherichia coli RepID=L2V3R6_ECOLX
D-alanyl-D-alanine dipeptidase
L2_040_089G1_scaffold_313_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8330..9880
DNA (1551bp) protein (517aa)
D-Ala-D-Ala transporter subunit n=2 Tax=Escherichia coli RepID=L2V2G4_ECOLX
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:ESK09390.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
ddpA; D-alanine-D-alanine ABC transporter periplasmic-binding protein
L2_040_089G1_scaffold_313_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9930..10904
DNA (975bp) protein (325aa)
D-Ala-D-Ala transporter subunit n=2 Tax=Escherichia coli RepID=L2V194_ECOLX
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:ESK09389.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
peptide ABC transporter permease
L2_040_089G1_scaffold_313_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10901..11797
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=149 Tax=Enterobacteriaceae RepID=B1IRX3_ECOLC
D-ala-D-ala transporter subunit
YddQ {ECO:0000313|EMBL:EHX31341.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_040_089G1_scaffold_313_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11794..12780
DNA (987bp) protein (329aa)
ABC transporter, ATP-binding protein n=23 Tax=Escherichia coli RepID=B2NDR4_ECOLX
D,D-dipeptide transport ATP-binding protein DdpD
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ELC09046.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_089G1_scaffold_313_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12773..13699
DNA (927bp) protein (309aa)
Probable D,D-dipeptide transport ATP-binding protein DdpF n=200 Tax=Escherichia RepID=DDPF_ECOLI
oligopeptide/dipeptide ABC transporter ATPase
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:ESP08802.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L2_040_089G1_scaffold_313_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13755..14186)
DNA (432bp) protein (144aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin osmC {ECO:0000313|EMBL:EZJ52188.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EZJ52188.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Peroxiredoxin OsmC n=833 Tax=Enterobacteriaceae RepID=OSMC_ECOLI
L2_040_089G1_scaffold_313_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14531..14746
DNA (216bp) protein (72aa)
Protein bdm n=222 Tax=Escherichia RepID=BDM_ECOLI
biofilm-dependent modulation protein
Biofilm-dependent modulation family protein {ECO:0000313|EMBL:ENB25300.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L2_040_089G1_scaffold_313_15
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14848..14985
DNA (138bp) protein (46aa)
Stationary-phase-induced ribosome-associated protein n=1369 Tax=Enterobacteriaceae RepID=SRA_ECO57
rpsV; 30S ribosomal subunit S22
Stationary-phase-induced ribosome-associated protein {ECO:0000313|EMBL:EOV50270.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L2_040_089G1_scaffold_313_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15142..16839
DNA (1698bp) protein (566aa)
NAD-dependent malic enzyme {ECO:0000255|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000255|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000255|HAMAP-Rule:MF_01619};; TaxID=481805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks).;"
sfcA; malate dehydrogenase (EC:1.1.1.38)
NAD-dependent malic enzyme n=30 Tax=Escherichia coli RepID=MAO1_ECOHS
L2_040_089G1_scaffold_313_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16973..17983
DNA (1011bp) protein (337aa)
adhP; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, propanol-preferring n=141 Tax=Escherichia RepID=ADHP_ECOLI
Oxidoreductase, zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EKJ80538.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_040_089G1_scaffold_313_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18129..18413
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=J7R0W1_ECOLX
yddM; putative DNA-binding transcriptional regulator
Addiction module antidote protein HigA {ECO:0000313|EMBL:EIG83836.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_040_089G1_scaffold_313_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18642..19295)
DNA (654bp) protein (218aa)
Formate dehydrogenase N gamma subunit n=1 Tax=Escherichia coli IS5 RepID=V6ET23_ECOLX
formate dehydrogenase-N subunit gamma
Formate dehydrogenase-N subunit gamma {ECO:0000313|EMBL:EJE72193.1}; TaxID=1165939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H11 str. CVM9455.;"
L2_040_089G1_scaffold_313_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19288..20172)
DNA (885bp) protein (295aa)
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:EFK44096.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EFK44096.1};; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit n=565 Tax=Bacteria RepID=FDNH_ECOLI
fdnH; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible
L2_040_089G1_scaffold_313_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20185..22596)
DNA (2412bp) protein (804aa)
fdnG; formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing (EC:1.2.1.2)
Formate dehydrogenase, nitrate-inducible, major subunit n=2 Tax=Escherichia coli RepID=L2V0H1_ECOLX
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:ELC09036.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_089G1_scaffold_313_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22629..23138)
DNA (510bp) protein (170aa)
fdnG; formate dehydrogenase-N subunit alpha, nitrate-inducible (EC:1.2.1.2)
Formate dehydrogenase-N, alpha subunit, nitrate-inducible n=9 Tax=Escherichia RepID=B7LQW5_ESCF3
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:ESD32100.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L2_040_089G1_scaffold_313_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23427..24251
DNA (825bp) protein (275aa)
Uncharacterized protein n=477 Tax=Enterobacteriaceae RepID=B6IAM4_ECOSE
yddG; hypothetical protein
YddG protein {ECO:0000313|EMBL:CAU97459.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L2_040_089G1_scaffold_313_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24510..24800
DNA (291bp) protein (97aa)
Putative uncharacterized protein YddL n=383 Tax=Enterobacteriaceae RepID=YDDL_ECOLI
yddL; putative lipoprotein
Outer membrane porin protein ompD {ECO:0000313|EMBL:ELE00825.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L2_040_089G1_scaffold_313_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24860..26155
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V2QVQ6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK09373.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L2_040_089G1_scaffold_313_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26479..27867
DNA (1389bp) protein (463aa)
Nitrite extrusion protein 2 n=327 Tax=Escherichia coli RepID=J7R0U9_ECOLX
narU; nitrate/nitrite transporter
Nitrite extrusion protein 2 {ECO:0000313|EMBL:ESA64628.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L2_040_089G1_scaffold_313_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27949..31689
DNA (3741bp) protein (1247aa)
Respiratory nitrate reductase 2 alpha chain n=11 Tax=Escherichia RepID=E3PLW9_ECOH1
Respiratory nitrate reductase 2 alpha chain {ECO:0000313|EMBL:ELC09030.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
respiratory nitrate reductase 2 alpha chain
L2_040_089G1_scaffold_313_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31686..33230
DNA (1545bp) protein (515aa)
Nitrate reductase, beta subunit {ECO:0000313|EMBL:KEO34866.1}; EC=1.7.99.4 {ECO:0000313|EMBL:KEO34866.1};; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
Cryptic nitrate reductase 2, beta subunit n=278 Tax=Enterobacteriaceae RepID=J7QQW7_ECOLX
narY; nitrate reductase 2 subunit beta
L2_040_089G1_scaffold_313_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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33230..33925
DNA (696bp) protein (232aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=3 Tax=Escherichia coli RepID=L2V177_ECOLX
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:ELC09028.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
narW; nitrate reductase 2 (NRZ), delta subunit (assembly subunit)
L2_040_089G1_scaffold_313_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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33922..34602
DNA (681bp) protein (227aa)
narV; nitrate reductase 2 subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase 2 gamma chain n=660 Tax=Enterobacteriaceae RepID=NARV_ECO57
Respiratory nitrate reductase 2 gamma chain {ECO:0000313|EMBL:ELE00818.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Displaying items 1-30 of 35 in total

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