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L2_040_089G1_scaffold_356

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_356_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(119..751)
DNA (633bp) protein (211aa)
Amino acid ABC transporter, permease protein n=1 Tax=Clostridium butyricum 5521 RepID=B1R0I3_CLOBU
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:ENZ34149.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glnP2; putative glutamine ABC transporter permease protein GlnP
L2_040_089G1_scaffold_356_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(753..1481)
DNA (729bp) protein (243aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEZ4_CLOBU
Glutamate transport permease protein {ECO:0000313|EMBL:KJZ96244.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
glnM; putative glutamine ABC transporter permease protein GlnM
L2_040_089G1_scaffold_356_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1481..2320)
DNA (840bp) protein (280aa)
Glutamine-binding protein (GlnBP) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JB05_CLOBU
Glutamine-binding protein (GlnBP) {ECO:0000313|EMBL:EEP54196.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
peb1A: major cell-binding factor
L2_040_089G1_scaffold_356_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2362..3159)
DNA (798bp) protein (266aa)
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLD3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95205.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC transporter
L2_040_089G1_scaffold_356_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3441..4310)
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
map2; methionine aminopeptidase Map (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK35_CLOBU
L2_040_089G1_scaffold_356_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4494..6002)
DNA (1509bp) protein (503aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dbpA; ATP-dependent RNA helicase DbpA (EC:3.6.4.13)
ATP-dependent RNA helicase DbpA n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN12_CLOBU
L2_040_089G1_scaffold_356_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6106..6366)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEZ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86445.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_356_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6771..6968
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=3 Tax=Clostridium butyricum RepID=B1R0H6_CLOBU
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EEP53382.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
thiS; thiamine biosynthesis protein ThiS
L2_040_089G1_scaffold_356_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6961..7779
DNA (819bp) protein (273aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ05_CLOBU
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:ENZ34157.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
thiF; thiamine biosynthesis protein ThiF
L2_040_089G1_scaffold_356_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7837..8613
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thiG; thiazole synthase ThiG (EC:2.8.1.10)
Thiazole synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK34_CLOBU
L2_040_089G1_scaffold_356_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8632..9789
DNA (1158bp) protein (386aa)
thiH2; 2-iminoacetate synthase ThiH (EC:4.1.99.19)
Thiazole biosynthesis protein ThiH n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95188.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_040_089G1_scaffold_356_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9776..10423
DNA (648bp) protein (216aa)
thiE2; thiamine-phosphate pyrophosphorylase ThiE (EC:2.5.1.3)
Regulatory protein teni n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEY9_CLOBU
Regulatory protein teni {ECO:0000313|EMBL:EEP54124.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_089G1_scaffold_356_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10554..11273)
DNA (720bp) protein (240aa)
Putative membrane protein n=3 Tax=Clostridium butyricum RepID=B1R0H0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95195.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_040_089G1_scaffold_356_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11505..12731
DNA (1227bp) protein (409aa)
yfmL; putative ATP-dependent RNA helicase YfmL (EC:3.6.4.13)
Dead/deah box helicase domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLC4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95187.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_040_089G1_scaffold_356_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12818..13147)
DNA (330bp) protein (110aa)
Thioredoxin n=3 Tax=Clostridium butyricum RepID=B1R0G8_CLOBU
Putative thioredoxin {ECO:0000313|EMBL:KJZ86378.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thioredoxin domain protein
L2_040_089G1_scaffold_356_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13178..13990)
DNA (813bp) protein (271aa)
HAD superfamily hydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86364.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cof-like hydrolase
L2_040_089G1_scaffold_356_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14206..15138
DNA (933bp) protein (311aa)
UAA transporter family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KEY5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86344.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ybfH1; transporter YbhF
L2_040_089G1_scaffold_356_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15231..15710)
DNA (480bp) protein (160aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1R0G5_CLOBU
Putative membrane protein {ECO:0000313|EMBL:KJZ86422.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative membrane protein
L2_040_089G1_scaffold_356_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15967..17031)
DNA (1065bp) protein (355aa)
UPI0003D5AD18 related cluster n=1 Tax=unknown RepID=UPI0003D5AD18
Uncharacterized protein {ECO:0000313|EMBL:KJZ95204.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_040_089G1_scaffold_356_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17208..18551)
DNA (1344bp) protein (448aa)
UPI0003D5DDC7 related cluster n=1 Tax=unknown RepID=UPI0003D5DDC7
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ86374.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mate efflux family protein
L2_040_089G1_scaffold_356_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18728..19315)
DNA (588bp) protein (196aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium butyricum RepID=C4ILG3_CLOBU
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEP53044.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
isopentenyldiphosphate isomerase
L2_040_089G1_scaffold_356_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19391..20404)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z3G0_CLOBU
Membrane spanning protein {ECO:0000313|EMBL:KJZ86387.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying 22 items

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