ggKbase home page

L2_040_089G1_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_364_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..119
DNA (117bp) protein (39aa)
UPI0003D5CF39 related cluster n=1 Tax=unknown RepID=UPI0003D5CF39
Multidrug transporter MatE {ECO:0000313|EMBL:KHD14638.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_040_089G1_scaffold_364_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

547..732
DNA (186bp) protein (62aa)
UPI0003D63DA2 related cluster n=1 Tax=unknown RepID=UPI0003D63DA2
Multidrug transporter {ECO:0000313|EMBL:KHD14637.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative efflux protein, MATE family
L2_040_089G1_scaffold_364_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

729..1799
DNA (1071bp) protein (357aa)
MATE efflux family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ97_CLOBU
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ88753.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MATE efflux family protein
L2_040_089G1_scaffold_364_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1875..2825
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YZG6_CLOBU
Vitamin B12 ABC transporter, B12-binding component BtuF {ECO:0000313|EMBL:KJZ88823.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
iron(III) dicitrate-binding periplasmic protein
L2_040_089G1_scaffold_364_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2812..3888
DNA (1077bp) protein (359aa)
UPI0003D62CDA related cluster n=1 Tax=unknown RepID=UPI0003D62CDA
Uncharacterized protein {ECO:0000313|EMBL:KJZ88760.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transport system permease
L2_040_089G1_scaffold_364_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3899..4687
DNA (789bp) protein (263aa)
Ferric enterobactin transport ATP-binding protein FepC n=2 Tax=Clostridium butyricum RepID=C4IBD4_CLOBU
Vitamin B12 ABC transporter, ATPase component BtuD {ECO:0000313|EMBL:KJZ88824.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter
L2_040_089G1_scaffold_364_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4801..5424
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JYZ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88763.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_364_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5469..6143
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JYZ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56209.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_364_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6159..7244
DNA (1086bp) protein (362aa)
Peptidase U32 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD2_CLOBU
Peptidase U32 {ECO:0000313|EMBL:EEP56153.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
peptidase U32
L2_040_089G1_scaffold_364_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7440..7991
DNA (552bp) protein (184aa)
Hemerythrin HHE cation binding domain protein n=3 Tax=Clostridium butyricum RepID=C4IBD1_CLOBU
Hemerythrin {ECO:0000313|EMBL:KHD14631.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hemerythrin HHE cation binding domain protein
L2_040_089G1_scaffold_364_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8196..8639
DNA (444bp) protein (148aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JDK7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56292.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_364_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8845..9261)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88744.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_364_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9258..9500)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88744.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_364_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9556..11337)
DNA (1782bp) protein (594aa)
signal transduction protein (EC:2.7.13.3)
Putative two-component sensor kinase YesM n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97235.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_040_089G1_scaffold_364_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11327..12868)
DNA (1542bp) protein (514aa)
Response regulator receiver protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC7_CLOBU
Response regulator receiver protein {ECO:0000313|EMBL:EEP56035.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_364_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13104..14084
DNA (981bp) protein (327aa)
ABC transporter membrane-spanning permease-sugar transport n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC6_CLOBU
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF {ECO:0000313|EMBL:KJZ88799.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sugar ABC transporter permease
L2_040_089G1_scaffold_364_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14200..15090
DNA (891bp) protein (297aa)
Protein LplC n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97233.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
protein LplC
L2_040_089G1_scaffold_364_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15288..16826
DNA (1539bp) protein (513aa)
Putative liporotein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC4_CLOBU
Putative liporotein {ECO:0000313|EMBL:EEP56273.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
family 1 extracellular solute-binding protein
L2_040_089G1_scaffold_364_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17063..18607
DNA (1545bp) protein (515aa)
Putative liporotein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94394.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
family 1 extracellular solute-binding protein
L2_040_089G1_scaffold_364_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18781..20844
DNA (2064bp) protein (688aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Beta-galactosidase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC2_CLOBU
beta-galactosidase
L2_040_089G1_scaffold_364_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20966..21991
DNA (1026bp) protein (342aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Glycosyl hydrolase 53 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBC1_CLOBU
arabinogalactan endo-1,4-beta-galactosidase
L2_040_089G1_scaffold_364_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22498..23184
DNA (687bp) protein (229aa)
UPI0003D5FF0D related cluster n=1 Tax=unknown RepID=UPI0003D5FF0D
Two-component response regulator {ECO:0000313|EMBL:EEP55966.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
regulatory component of sensory transduction system
L2_040_089G1_scaffold_364_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23171..24160
DNA (990bp) protein (330aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D6486F related cluster n=1 Tax=unknown RepID=UPI0003D6486F
hssS; sensory transduction histidine kinase
L2_040_089G1_scaffold_364_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24244..24930
DNA (687bp) protein (229aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000313|EMBL:EEP56261.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEP56261.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
macB2; macrolide export ATP-binding/permease protein MacB (EC:3.6.3.-)
Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBB8_CLOBU
L2_040_089G1_scaffold_364_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24930..27524
DNA (2595bp) protein (865aa)
UPI0003D68726 related cluster n=1 Tax=unknown RepID=UPI0003D68726
ABC transporter permease {ECO:0000313|EMBL:KHD14620.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transporter permease
L2_040_089G1_scaffold_364_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27696..28406
DNA (711bp) protein (237aa)
Response regulator n=2 Tax=Clostridium butyricum RepID=M8JCA1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32867.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
LytTr family DNA-binding response regulator
L2_040_089G1_scaffold_364_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28418..29359
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0A8W6_CLOBU
Putative membrane protein {ECO:0000313|EMBL:EEP56570.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
histidine kinase
L2_040_089G1_scaffold_364_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29419..29616
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0A8W6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32868.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L2_040_089G1_scaffold_364_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29725..30198
DNA (474bp) protein (158aa)
CAAX amino protease family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K706_CLOBU
CAAX amino protease family protein {ECO:0000313|EMBL:EEP56310.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative metal-dependent membrane protease
L2_040_089G1_scaffold_364_30
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30260..30640
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJA4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94398.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
abortive infection protein
Displaying items 1-30 of 32 in total

View Taxonomy