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L2_040_089G1_scaffold_372

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_372_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..673
DNA (672bp) protein (224aa)
Lipoprotein NlpI n=1 Tax=Escherichia coli H736 RepID=F4SNP2_ECOLX
hypothetical protein
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L2_040_089G1_scaffold_372_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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853..2646
DNA (1794bp) protein (598aa)
deaD; cold-shock DEAD box protein A (EC:3.6.1.-)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
ATP-dependent RNA helicase DeaD n=860 Tax=Bacteria RepID=DEAD_ECOL6
L2_040_089G1_scaffold_372_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2800..4044
DNA (1245bp) protein (415aa)
Tryptophan-specific transporter n=2 Tax=Escherichia coli RepID=L2VJ65_ECOLX
Tryptophan-specific transporter {ECO:0000313|EMBL:ELC14480.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
tryptophan permease
L2_040_089G1_scaffold_372_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4162..5169)
DNA (1008bp) protein (336aa)
Luciferase oxidoreductase, group 1 family protein {ECO:0000313|EMBL:KDZ39042.1}; EC=1.-.-.- {ECO:0000313|EMBL:KDZ39042.1};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
Uncharacterized protein YhbW n=714 Tax=Enterobacteriaceae RepID=YHBW_ECOL6
luciferase-like monooxygenase
L2_040_089G1_scaffold_372_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5250..6128)
DNA (879bp) protein (293aa)
Uncharacterized protein yhbV n=133 Tax=Escherichia RepID=E2QEJ4_ECOLX
U32 family peptidase
Peptidase U32 family protein {ECO:0000313|EMBL:EHU06463.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_040_089G1_scaffold_372_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6137..7132)
DNA (996bp) protein (332aa)
U32 family peptidase (EC:3.4.-.-)
Peptidase, U32 family n=251 Tax=Enterobacteriaceae RepID=A7ZS53_ECO24
Protease {ECO:0000313|EMBL:ESP07503.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L2_040_089G1_scaffold_372_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7341..7865
DNA (525bp) protein (175aa)
Uncharacterized protein YhbT n=1119 Tax=Enterobacteriaceae RepID=YHBT_ECO57
yhbT; hypothetical protein
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:EID68135.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L2_040_089G1_scaffold_372_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7859..8362
DNA (504bp) protein (168aa)
Uncharacterized N-acetyltransferase YhbS n=1340 Tax=Enterobacteriaceae RepID=YHBS_ECO57
yhbS; hypothetical protein
Acyltransferase {ECO:0000313|EMBL:EQZ98233.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L2_040_089G1_scaffold_372_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8349..8651)
DNA (303bp) protein (101aa)
UPF0213 protein YhbQ n=312 Tax=Enterobacteriaceae RepID=YHBQ_ECO55
GIY-YIG nuclease superfamily protein
UPF0213 protein YhbQ {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=1165939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H11 str. CVM9455.;"
L2_040_089G1_scaffold_372_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8702..9145
DNA (444bp) protein (148aa)
UPF0306 protein YhbP n=19 Tax=Enterobacteriaceae RepID=YHBP_SHISS
hypothetical protein
UPF0306 protein YhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
L2_040_089G1_scaffold_372_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9125..9643)
DNA (519bp) protein (173aa)
Protein yhbO n=2 Tax=Escherichia coli RepID=L2VIX8_ECOLX
Protein yhbO {ECO:0000313|EMBL:ELC14472.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_089G1_scaffold_372_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9771..10406
DNA (636bp) protein (212aa)
NAD-dependent epimerase/dehydratase n=2 Tax=Escherichia coli RepID=L2VG73_ECOLX
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ESK15828.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
yraR; hypothetical protein
L2_040_089G1_scaffold_372_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10479..11519
DNA (1041bp) protein (347aa)
Permease n=2 Tax=Escherichia coli RepID=L2VJ55_ECOLX
Permease {ECO:0000313|EMBL:ELC14470.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_089G1_scaffold_372_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11724..12299)
DNA (576bp) protein (192aa)
Uncharacterized protein YraP n=1098 Tax=Enterobacteriaceae RepID=YRAP_ECO57
yraP; outer membrane lipoprotein
BON domain protein {ECO:0000313|EMBL:KEJ44649.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_040_089G1_scaffold_372_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12309..12899)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=655 Tax=Enterobacteriaceae RepID=DIAA_ECO57
diaA; DnaA initiator-associating factor for replication initiation
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L2_040_089G1_scaffold_372_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12919..13314)
DNA (396bp) protein (132aa)
UPF0102 protein YraN n=214 Tax=Enterobacteriaceae RepID=YRAN_ECO55
yraN; hypothetical protein
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
L2_040_089G1_scaffold_372_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13272..15308)
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=2 Tax=Escherichia coli RepID=L2VG68_ECOLX
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L2_040_089G1_scaffold_372_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15373..16233
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
Ribosomal RNA small subunit methyltransferase I n=700 Tax=Enterobacteriaceae RepID=RSMI_ECO57
yraL; hypothetical protein
L2_040_089G1_scaffold_372_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16276..17367)
DNA (1092bp) protein (364aa)
Uncharacterized fimbrial-like protein YraK n=157 Tax=Escherichia RepID=YRAK_ECOLI
yraK; putative fimbrial-like adhesin protein
Fimbrial family protein {ECO:0000313|EMBL:KEN53059.1}; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C3.;"
L2_040_089G1_scaffold_372_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17378..19894)
DNA (2517bp) protein (839aa)
Outer membrane protein n=2 Tax=Escherichia coli RepID=L2VGV2_ECOLX
Outer membrane protein {ECO:0000313|EMBL:ELC14463.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
fimbrial biogenesis outer membrane usher protein
L2_040_089G1_scaffold_372_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19923..20210)
DNA (288bp) protein (96aa)
Pili assembly chaperone, N-terminal n=13 Tax=Escherichia coli RepID=C6EH82_ECOBD
Pili assembly chaperone, N-terminal
Pili assembly chaperone, N-terminal {ECO:0000313|EMBL:ACT27667.1}; Flags: Precursor;; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
Displaying 21 items

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