ggKbase home page

L2_040_089G1_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_413_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..201
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN92_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34229.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
extracellular ligand-binding receptor
L2_040_089G1_scaffold_413_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

292..1176
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACZ3_CLOBU
ABC transporter permease {ECO:0000313|EMBL:KHD16937.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
livH2; high-affinity branched-chain amino acid transport system permease protein LivH
L2_040_089G1_scaffold_413_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1189..2235
DNA (1047bp) protein (349aa)
High-affinity branched-chain amino acid transport system permeaseprotein LivM n=4 Tax=Clostridium butyricum RepID=B1QU94_CLOBU
High-affinity branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:EEP54301.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
inner-membrane translocator
L2_040_089G1_scaffold_413_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2238..3005
DNA (768bp) protein (256aa)
High-affinity branched-chain amino acid transport ATP-binding proteinlivG n=4 Tax=Clostridium butyricum RepID=B1QU95_CLOBU
LivG {ECO:0000313|EMBL:EEP54435.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG
L2_040_089G1_scaffold_413_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3007..3711
DNA (705bp) protein (235aa)
Abc transporter, hydrophobic amino acid uptake transporter family, ATP-binding protein n=3 Tax=Clostridium butyricum RepID=B1QU96_CLOBU
Abc transporter, hydrophobic amino acid uptake transporter (Haat) family, ATP-binding protein {ECO:0000313|EMBL:EEP53836.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ABC transporter
L2_040_089G1_scaffold_413_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3737..4363
DNA (627bp) protein (209aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QU97_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54556.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_413_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4612..5244
DNA (633bp) protein (211aa)
Stage II sporulation protein M n=2 Tax=Clostridium butyricum RepID=B1QU98_CLOBU
Stage II sporulation protein M (SpoIIM) {ECO:0000313|EMBL:KJZ86402.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
stage II sporulation protein M
L2_040_089G1_scaffold_413_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5336..6214
DNA (879bp) protein (293aa)
Tyrosine recombinase XerD n=4 Tax=Clostridium butyricum RepID=B1QU99_CLOBU
Phage integrase family protein {ECO:0000313|EMBL:EEP54693.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
xerD3; tyrosine recombinase XerD
L2_040_089G1_scaffold_413_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6410..6610
DNA (201bp) protein (67aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QUA0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54141.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_089G1_scaffold_413_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6613..7275
DNA (663bp) protein (221aa)
UPI0003D5A6CE related cluster n=1 Tax=unknown RepID=UPI0003D5A6CE
Uncharacterized protein {ECO:0000313|EMBL:ETI87751.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_040_089G1_scaffold_413_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7419..8495
DNA (1077bp) protein (359aa)
UPI0003D64723 related cluster n=1 Tax=unknown RepID=UPI0003D64723
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ETI87750.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
methyl-accepting chemotaxis protein
L2_040_089G1_scaffold_413_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8767..9573
DNA (807bp) protein (269aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QUA3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54911.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_413_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9641..11155)
DNA (1515bp) protein (505aa)
Sodium/proline symporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ88_CLOBU
Sodium/proline symporter {ECO:0000313|EMBL:ENZ34217.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putP; sodium/proline symporter
L2_040_089G1_scaffold_413_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11335..11931
DNA (597bp) protein (199aa)
UPI0003D5BE99 related cluster n=1 Tax=unknown RepID=UPI0003D5BE99
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ETI90093.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
N-acetyltransferase GCN5
L2_040_089G1_scaffold_413_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11953..12582
DNA (630bp) protein (210aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKG2_CLOBU
Thiol-disulfide isomerase and thioredoxin {ECO:0000313|EMBL:KJZ86396.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
L2_040_089G1_scaffold_413_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12681..13565
DNA (885bp) protein (295aa)
Transporter n=2 Tax=Clostridium butyricum RepID=C4ILA8_CLOBU
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:KJZ86377.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
permeases of the drug/metabolite transporter (DMT) superfamily
L2_040_089G1_scaffold_413_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13611..13802
DNA (192bp) protein (64aa)
UPI0003D6872D related cluster n=1 Tax=unknown RepID=UPI0003D6872D
Uncharacterized protein {ECO:0000313|EMBL:ETI90090.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_040_089G1_scaffold_413_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13771..14181
DNA (411bp) protein (137aa)
Flavodoxin n=2 Tax=Clostridium butyricum RepID=C4ILB9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96024.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
flavodoxin
L2_040_089G1_scaffold_413_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14206..14841
DNA (636bp) protein (212aa)
UPI0003A6C811 related cluster n=1 Tax=unknown RepID=UPI0003A6C811
Uncharacterized protein {ECO:0000313|EMBL:KHD16952.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_040_089G1_scaffold_413_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15252..15791
DNA (540bp) protein (180aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=N9Z2W2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34211.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NUDIX hydrolase
L2_040_089G1_scaffold_413_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16014..16259)
DNA (246bp) protein (82aa)
Spore coat protein CotJC n=3 Tax=Clostridium butyricum RepID=C4ILC2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86353.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein cotJC
L2_040_089G1_scaffold_413_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16270..17871)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN80_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34209.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Resolvase domain-containing protein
L2_040_089G1_scaffold_413_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18088..18234
DNA (147bp) protein (49aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS68_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34208.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_089G1_scaffold_413_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18478..18603
DNA (126bp) protein (42aa)
Thioredoxin reductase n=2 Tax=Clostridium butyricum RepID=M8KFB8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96019.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L2_040_089G1_scaffold_413_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18636..19319
DNA (684bp) protein (228aa)
Thioredoxin reductase {ECO:0000313|EMBL:KJZ93090.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KJZ93090.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Thioredoxin reductase n=2 Tax=Clostridium butyricum RepID=M8KFB8_CLOBU
pyridine nucleotide-disulfide oxidoreductase family protein
L2_040_089G1_scaffold_413_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19448..19762
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K727_CLOBU
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
thioredoxin
L2_040_089G1_scaffold_413_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19830..21206
DNA (1377bp) protein (459aa)
Dihydrolipoamide dehydrogenase Mercuric ion reductase {ECO:0000313|EMBL:KJZ86384.1}; EC=1.16.1.1 {ECO:0000313|EMBL:KJZ86384.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3K6_CLOBU
pyridine nucleotide-disulphide oxidoreductase
L2_040_089G1_scaffold_413_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21223..21720
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN73_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86425.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_413_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21750..22088
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACX6_CLOBU
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:KJZ86438.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_413_30
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22184..23416
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ75_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96016.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cytochrome C-type biogenesis protein
Displaying items 1-30 of 37 in total

View Taxonomy