ggKbase home page

L2_040_089G1_scaffold_430

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_430_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(367..840)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APT7_CLOBU
DNA-binding protein {ECO:0000313|EMBL:KHD13931.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_040_089G1_scaffold_430_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1024..1377
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AG56_CLOBU
Hydrolase of alpha/beta superfamily, possible membrane associated lipase {ECO:0000313|EMBL:KJZ92977.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L2_040_089G1_scaffold_430_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1341..2300
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AG56_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35358.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_040_089G1_scaffold_430_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2640..3914
DNA (1275bp) protein (425aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hisS; histidine--tRNA ligase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF16_CLOBU
L2_040_089G1_scaffold_430_5
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4051..4773
DNA (723bp) protein (241aa)
Peptidase C1A papain n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TDI7_9CLOT
Peptidase C1A papain {ECO:0000313|EMBL:EGD47625.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
cysteine protease
L2_040_089G1_scaffold_430_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5075..5299
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QSK0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53794.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_089G1_scaffold_430_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5479..6012
DNA (534bp) protein (178aa)
5-nitroimidazole antibiotic resistance protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK70_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
5-nitroimidazole antibiotic resistance protein
L2_040_089G1_scaffold_430_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6068..6610
DNA (543bp) protein (181aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLG9_CLOBU
Ribosomal-protein-S5p-alanine acetyltransferase {ECO:0000313|EMBL:KJZ88326.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_430_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6864..9185)
DNA (2322bp) protein (774aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Alpha-amylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JB34_CLOBU
amyA; Alpha-amylase
L2_040_089G1_scaffold_430_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9638..12307
DNA (2670bp) protein (890aa)
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:KJZ88266.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KJZ88266.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mgtA1; Magnesium-transporting ATPase, P-type 1;Tn916-like, CTn7-Orf12 (EC:3.6.3.2)
Magnesium-translocating P-type ATPase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATI1_CLOBU
L2_040_089G1_scaffold_430_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12324..12776
DNA (453bp) protein (151aa)
Transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8K6S4_CLOBU
Two-component system response regulator {ECO:0000313|EMBL:ENZ35351.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
winged helix family two component response transcriptional regulator
L2_040_089G1_scaffold_430_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12964..15696
DNA (2733bp) protein (911aa)
Mg(2+) transport ATPase, P-type {ECO:0000313|EMBL:KJZ88268.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KJZ88268.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Magnesium-importing ATPase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK74_CLOBU
magnesium-translocating P-type ATPase
L2_040_089G1_scaffold_430_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15764..16231
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARG1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88308.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_430_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16318..17934)
DNA (1617bp) protein (539aa)
Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Clostridium butyricum DKU-01 RepID=M8JB40_CLOBU
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domain) with PAS/PAC sensor(S) {ECO:0000313|EMBL:KJZ88249.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
diguanylate cyclase/phosphodiesterase
L2_040_089G1_scaffold_430_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18364..19527
DNA (1164bp) protein (388aa)
Methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF23_CLOBU
Methyltransferase {ECO:0000313|EMBL:EEP54373.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyltransferase TRM13 family protein
L2_040_089G1_scaffold_430_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19638..20552
DNA (915bp) protein (305aa)
Chemotaxis protein CheV n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6S9_CLOBU
Chemotaxis protein CheV {ECO:0000313|EMBL:EEP53602.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cheV; chemotaxis protein CheV
L2_040_089G1_scaffold_430_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20636..21067)
DNA (432bp) protein (144aa)
Transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QYB4_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ88253.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MarR family transcriptional regulator
L2_040_089G1_scaffold_430_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21575..22729
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARF5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35344.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative secretion protein HlyD family protein
L2_040_089G1_scaffold_430_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22741..24099
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG45_CLOBU
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:KJZ88285.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_430_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24096..25325
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ATH3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35342.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative ABC-2 type transporter
L2_040_089G1_scaffold_430_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25552..26964
DNA (1413bp) protein (471aa)
ytjP; putative dipeptidase YtjP (EC:3.4.13.-)
Dipeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6T3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35341.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_089G1_scaffold_430_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27466..28689
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6M1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35340.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
choline-binding protein Cbp5
L2_040_089G1_scaffold_430_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29205..30335
DNA (1131bp) protein (377aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Calcium-transporting ATPase 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJM8_CLOBU
Putative cation-transporting ATPase {ECO:0000313|EMBL:KJZ88269.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Displaying 23 items

View Taxonomy