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L2_040_089G1_scaffold_488

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_089G1_scaffold_488_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
Spore coat polysaccharide biosynthesis protein SpsC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCZ1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97556.1}; Flags: Fragment;; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L2_040_089G1_scaffold_488_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(372..698)
DNA (327bp) protein (109aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hisE; phosphoribosyl-ATP pyrophosphatase HisE (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Clostridium butyricum RepID=M8JCQ3_CLOBU
L2_040_089G1_scaffold_488_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(732..1061)
DNA (330bp) protein (110aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Clostridium butyricum RepID=M8JN56_CLOBU
hisI; phosphoribosyl-AMP cyclohydrolase
L2_040_089G1_scaffold_488_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1090..1851)
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMU5_CLOBU
imidazole glycerol phosphate synthase subunit HisF
L2_040_089G1_scaffold_488_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1901..2617)
DNA (717bp) protein (239aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Clostridium butyricum RepID=B1QTN6_CLOBU
L2_040_089G1_scaffold_488_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2614..3234)
DNA (621bp) protein (207aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=4 Tax=Clostridium butyricum RepID=B1QTN7_CLOBU
L2_040_089G1_scaffold_488_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3262..3849)
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hisB; imidazoleglycerol-phosphate dehydratase HisB (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=4 Tax=Clostridium butyricum RepID=B1QTN8_CLOBU
L2_040_089G1_scaffold_488_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3872..4909)
DNA (1038bp) protein (346aa)
hisC2; histidinol-phosphate aminotransferase HisC (EC:2.6.1.9)
Histidinol-phosphate transaminase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0I1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86623.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_089G1_scaffold_488_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4896..6194)
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLW1_CLOBU
L2_040_089G1_scaffold_488_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6375..7004)
DNA (630bp) protein (210aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hisG; ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTP1_CLOBU
L2_040_089G1_scaffold_488_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7049..8182)
DNA (1134bp) protein (378aa)
ATP phosphoribosyltransferase regulatory subunit n=3 Tax=Clostridium butyricum RepID=B1QTP2_CLOBU
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit
L2_040_089G1_scaffold_488_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8534..9172
DNA (639bp) protein (213aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTP3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86628.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_089G1_scaffold_488_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9207..10364)
DNA (1158bp) protein (386aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
thiI; tRNA sulfurtransferase ThiI (EC:2.8.1.4)
Probable tRNA sulfurtransferase n=4 Tax=Clostridium butyricum RepID=B1QTP4_CLOBU
L2_040_089G1_scaffold_488_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10364..11512)
DNA (1149bp) protein (383aa)
Cysteine desulfurase {ECO:0000313|EMBL:KJZ85383.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJZ85383.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMV3_CLOBU
class V aminotransferase
L2_040_089G1_scaffold_488_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11752..12612)
DNA (861bp) protein (287aa)
2-hydroxy-3-oxopropionate reductase (Tartronatesemialdehyde reductase) (Tsar) {ECO:0000313|EMBL:EEP53295.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EEP53295.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase (Tartronatesemialdehyde reductase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8E2_CLOBU
L2_040_089G1_scaffold_488_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12628..13722)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKY4_CLOBU
Diguanylate cyclase {ECO:0000313|EMBL:KHD16100.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
HD-GYP hydrolase domain containing protein
L2_040_089G1_scaffold_488_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13991..14788)
DNA (798bp) protein (266aa)
RelA/SpoT domain protein n=2 Tax=Clostridium butyricum RepID=M8JCN9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86612.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RelA/SpoT domain protein
L2_040_089G1_scaffold_488_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14876..15826)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0I9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33446.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 18 items

View Taxonomy