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L2_040_124G1_scaffold_1175

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_1175_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..318)
DNA (318bp) protein (106aa)
Galactoside-symporter n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=Q0ZII8_BIFBI
lacS; lactose permease
LacS Galactoside symporter {ECO:0000313|EMBL:CDB21876.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_040_124G1_scaffold_1175_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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684..3623
DNA (2940bp) protein (980aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Beta-galactosidase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2ILZ4_BIFBI
lacZ3; beta-galactosidase
L2_040_124G1_scaffold_1175_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3642..4145
DNA (504bp) protein (168aa)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQF6_BIFBS
nagA2; N-acetylglucosamine-6-phosphate deacetylase
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:ADO53612.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_1175_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4136..5302)
DNA (1167bp) protein (389aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DUG9_BIFBI
LacI transcription regulator {ECO:0000313|EMBL:ABE00942.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
lacR; HTH-type transcriptional regulator
L2_040_124G1_scaffold_1175_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5322..6608)
DNA (1287bp) protein (429aa)
histidine-kinase (EC:2.7.13.3)
Putative histidine-kinase {ECO:0000313|EMBL:KFI43785.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFI43785.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Histidine kinase n=2 Tax=Bifidobacterium bifidum RepID=E3EQF8_BIFBS
L2_040_124G1_scaffold_1175_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6605..7261)
DNA (657bp) protein (219aa)
Response regulator receiver n=6 Tax=Bifidobacterium bifidum RepID=E3EQF9_BIFBS
response regulator
Response regulator receiver {ECO:0000313|EMBL:KFI43786.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_040_124G1_scaffold_1175_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7447..8112
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WJH2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43787.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_040_124G1_scaffold_1175_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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8088..9221
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=U2DPC3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83437.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_040_124G1_scaffold_1175_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9211..9813
DNA (603bp) protein (201aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ABC transporter-related protein n=5 Tax=Bifidobacterium bifidum RepID=E3EQG2_BIFBS
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF14872.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_040_124G1_scaffold_1175_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9810..10907
DNA (1098bp) protein (366aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=U2CFV7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53619.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_1175_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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11084..11365
DNA (282bp) protein (94aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=I3WJH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53620.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_1175_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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11570..12988
DNA (1419bp) protein (473aa)
Permease protein of ABC transporter system n=7 Tax=Bifidobacterium bifidum RepID=E3EQG5_BIFBS
ABC transporter
Uncharacterized protein {ECO:0000313|EMBL:EPD75888.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying 12 items

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