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L2_040_124G1_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 209 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_14_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(512..2899)
DNA (2388bp) protein (796aa)
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EQG78619.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EQG78619.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transportingP-type ATPase (EC:3.6.3.5)
Cadmium-translocating P-type ATPase (Fragment) n=1 Tax=Clostridium difficile CD127 RepID=T4ZU73_CLODI
L2_040_124G1_scaffold_14_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2922..3287)
DNA (366bp) protein (122aa)
ArsR-family transcriptional regulator n=208 Tax=Clostridium difficile RepID=C9XJ89_CLODC
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCL30195.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_040_124G1_scaffold_14_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3486..4334
DNA (849bp) protein (283aa)
Uncharacterized protein n=16 Tax=Clostridium difficile RepID=T2UIF8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI94121.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
putative spore coat assembly asparagine-richprotein
L2_040_124G1_scaffold_14_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4771..5859)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=166 Tax=Clostridium difficile RepID=T3IHK5_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ34585.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_040_124G1_scaffold_14_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5984..6712
DNA (729bp) protein (243aa)
Putative hydrolase, HAD superfamily, subfamily IB {ECO:0000313|EMBL:CCK99356.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCK99356.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
HAD phosphoserine phosphatase-like hydrolase, IB family protein n=221 Tax=Clostridium difficile RepID=C9XJ86_CLODC
phosphoserine phosphatase
L2_040_124G1_scaffold_14_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6914..7405)
DNA (492bp) protein (164aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=G6BSY2_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDS83478.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_040_124G1_scaffold_14_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7416..7859)
DNA (444bp) protein (148aa)
Uncharacterized protein n=81 Tax=Clostridium difficile RepID=G6B2I2_CLODI
hypothetical protein
Putative 'four-disulfide core' protein {ECO:0000313|EMBL:EQG78648.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_14_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7849..8688)
DNA (840bp) protein (280aa)
Uncharacterized protein n=198 Tax=Clostridium difficile RepID=C9XJ83_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22625.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_14_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8907..10292)
DNA (1386bp) protein (462aa)
Putative glutamate carboxypeptidase {ECO:0000313|EMBL:CCL22624.1}; EC=3.5.1.- {ECO:0000313|EMBL:CCL22624.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Amidohydrolase n=73 Tax=Clostridium difficile RepID=G6BSY5_CLODI
abgB1; aminobenzoyl-glutamate utilization protein
L2_040_124G1_scaffold_14_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10465..11208)
DNA (744bp) protein (248aa)
Uncharacterized protein n=144 Tax=Clostridium difficile RepID=C9XJ79_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE01993.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_040_124G1_scaffold_14_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11228..12490)
DNA (1263bp) protein (421aa)
Peptidase, ArgE/DapE family protein n=11 Tax=Clostridium difficile RepID=T3EQH7_CLODI
acetylornithine deacetylase
Putative acetylornithine deacetylase {ECO:0000313|EMBL:CBE01991.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_040_124G1_scaffold_14_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12674..13672)
DNA (999bp) protein (333aa)
Ribose ABC transporter, permease protein n=106 Tax=Clostridium difficile RepID=C9XJ77_CLODC
ribose ABC transporter, permease protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:EQE70271.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_14_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13656..15167)
DNA (1512bp) protein (504aa)
rbsA; ABC-type transport system, ribose-specificATP-binding protein (EC:3.6.3.-)
ABC-type transport system, ribose-specific ATP-binding protein {ECO:0000313|EMBL:CAJ67123.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ67123.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein n=3 Tax=Clostridium difficile RepID=T2YXD2_CLODI
L2_040_124G1_scaffold_14_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15221..16183)
DNA (963bp) protein (321aa)
D-ribose ABC transporter, substrate-binding protein n=176 Tax=Clostridium difficile RepID=C9XJ75_CLODC
D-ribose ABC transporter substrate-binding protein
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:EQE70184.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_14_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16231..17121)
DNA (891bp) protein (297aa)
Ribokinase {ECO:0000313|EMBL:EQE70204.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EQE70204.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
rbsK; Ribokinase, pfkB family (EC:2.7.1.15)
Ribokinase n=137 Tax=Clostridium difficile RepID=G6BSZ1_CLODI
L2_040_124G1_scaffold_14_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17163..18185)
DNA (1023bp) protein (341aa)
Sugar-binding domain protein n=2 Tax=Clostridium difficile RepID=G6BSZ2_CLODI
Sugar-binding domain protein {ECO:0000313|EMBL:EHJ34597.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
rbsR; ribose operon repressor
L2_040_124G1_scaffold_14_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18405..19382)
DNA (978bp) protein (326aa)
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Biotin synthase n=127 Tax=Clostridium difficile RepID=BIOB_CLOD6
L2_040_124G1_scaffold_14_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19585..19848)
DNA (264bp) protein (88aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=C9XJ71_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK99343.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L2_040_124G1_scaffold_14_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19918..20991)
DNA (1074bp) protein (358aa)
4Fe-4S binding domain protein n=197 Tax=Clostridium difficile RepID=C9XJ70_CLODC
iron-sulfur-binding protein
Putative iron-sulfur-binding protein {ECO:0000313|EMBL:CBE01977.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_040_124G1_scaffold_14_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21250..22008)
DNA (759bp) protein (253aa)
ABC-2 transporter family protein n=1 Tax=Clostridium difficile DA00211 RepID=T3UUX5_CLODI
ABC-type transportsystem,bacitracin/multidrug-family permease
ABC transporter permease {ECO:0000313|EMBL:CKH75509.1}; ABC-type transportsystem,bacitracin/multidrug-family permease {ECO:0000313|EMBL:CEJ96810.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_040_124G1_scaffold_14_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22005..22925)
DNA (921bp) protein (307aa)
ABC-type transportsystem,bacitracin/multidrug-family ATP-binding protein (EC:3.6.3.30)
ABC-type transport system,bacitracin/multidrug-family ATP-binding protein n=50 Tax=Clostridium difficile RepID=U3W8F6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQE70210.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_14_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22922..23122)
DNA (201bp) protein (67aa)
Phospholipase D/nuclease family protein n=201 Tax=Clostridium difficile RepID=T3ILT5_CLODC
uncharacterised protein
Phospholipase D/nuclease family protein {ECO:0000313|EMBL:EQE70269.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_14_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23127..24221)
DNA (1095bp) protein (365aa)
Helix-turn-helix family protein n=156 Tax=Clostridium difficile RepID=T3IGQ0_CLODC
Transcriptional regulator, HTH-type
Helix-turn-helix family protein {ECO:0000313|EMBL:EQG78681.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_14_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25047..25166)
DNA (120bp) protein (40aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=G6BT00_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE70243.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_14_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25183..26490)
DNA (1308bp) protein (436aa)
Dipeptidase family protein {ECO:0000313|EMBL:EQE70257.1}; EC=3.4.13.- {ECO:0000313|EMBL:EQE70257.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative peptidase, M20A family (EC:3.5.1.-)
Dipeptidase family protein n=82 Tax=Clostridium difficile RepID=T2V9K0_CLODI
L2_040_124G1_scaffold_14_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26555..27034)
DNA (480bp) protein (160aa)
L-2-amino-thiazoline-4-carboxylic acid hydrolase family protein n=199 Tax=Clostridium difficile RepID=C9XJ65_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22386.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_14_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27081..27944)
DNA (864bp) protein (288aa)
PTS system mannose/fructose/sorbose IID component family protein n=185 Tax=Clostridium difficile RepID=T3ILX5_CLODC
PTS system, mannose/fructose/sorbose IIDcomponent
PTS system, mannose/fructose/sorbose IID component {ECO:0000313|EMBL:CCL22385.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_14_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27944..28699)
DNA (756bp) protein (252aa)
PTS system sorbose-specific iic component family protein n=213 Tax=Clostridium difficile RepID=C9XJ63_CLODC
PTS system transporter subunit IIC
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EQG78749.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_14_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28726..29214)
DNA (489bp) protein (163aa)
PTS system sorbose subIIB component family protein n=200 Tax=Clostridium difficile RepID=C9XJ62_CLODC
PTS system transporter subunit IIB
PTS system sorbose subIIB component family protein {ECO:0000313|EMBL:EQE70203.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_14_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29232..29633)
DNA (402bp) protein (134aa)
PTS system fructose IIA component family protein n=187 Tax=Clostridium difficile RepID=C9XJ61_CLODC
PTS system, IIa component
PTS system, mannose/fructose/sorbose IIA component {ECO:0000313|EMBL:CAJ67108.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Displaying items 1-30 of 209 in total

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