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L2_040_124G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_82_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)
IS30 family transposase n=2 Tax=Bifidobacterium bifidum RepID=E4NY46_BIFBP
IS30 family transposase
Transposase {ECO:0000313|EMBL:EKE49708.1}; Flags: Fragment;; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_040_124G1_scaffold_82_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

280..1311
DNA (1032bp) protein (344aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFR51292.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFR51292.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VCH7_BIFBI
glycosyltransferase family protein
L2_040_124G1_scaffold_82_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1388..3376)
DNA (1989bp) protein (663aa)
Rhamnan synthesis protein F n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VCH6_BIFBI
Rhamnan synthesis protein F {ECO:0000313|EMBL:EFR51291.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Lipopolysaccharide biosynthesis protein
L2_040_124G1_scaffold_82_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3407..4921)
DNA (1515bp) protein (505aa)
glycosyltransferase n=1 Tax=Bifidobacterium bifidum RepID=UPI00036B107D
Uncharacterized protein {ECO:0000313|EMBL:EFR51290.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_040_124G1_scaffold_82_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5096..6310)
DNA (1215bp) protein (405aa)
ATP-binding protein ABC transporter system for polysaccharides n=3 Tax=Bifidobacterium bifidum RepID=E3ENI7_BIFBS
sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKE51069.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_040_124G1_scaffold_82_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6310..7074)
DNA (765bp) protein (255aa)
Permease protein of ABC transporter system for polysaccharides n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENI6_BIFBS
sugar ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_82_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7165..8058)
DNA (894bp) protein (298aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Bifidobacterium bifidum RepID=E3ENI5_BIFBS
glucose-1-phosphate thymidylyltransferase
L2_040_124G1_scaffold_82_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8394..9221
DNA (828bp) protein (276aa)
Transposase, Mutator family n=2 Tax=Bifidobacterium bifidum RepID=E4VCH1_BIFBI
Transposase, Mutator family {ECO:0000313|EMBL:EFR51286.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
transposase, mutator type
L2_040_124G1_scaffold_82_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9184..9669)
DNA (486bp) protein (162aa)
Transposase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MV37_BIFBI
transposase
Transposase {ECO:0000313|EMBL:EKF15908.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_040_124G1_scaffold_82_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9657..10838)
DNA (1182bp) protein (394aa)
Transposase n=3 Tax=Bifidobacterium bifidum RepID=E3ENI3_BIFBS
transposase
Transposase {ECO:0000313|EMBL:ADO52261.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_82_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11237..11638
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENI2_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52260.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_82_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11799..12065
DNA (267bp) protein (89aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4VCG6_BIFBI
transposase
Putative transposase {ECO:0000313|EMBL:ADO52259.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_82_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12271..13719)
DNA (1449bp) protein (483aa)
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VCG5_BIFBI
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EFR51280.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
L2_040_124G1_scaffold_82_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13833..15173)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VCG4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52257.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_82_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15517..16539)
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
dTDP-glucose 4,6-dehydratase n=3 Tax=Bifidobacterium bifidum RepID=E3ENH8_BIFBS
rmlB2; dTDP-glucose 4,6-dehydratase
L2_040_124G1_scaffold_82_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16647..18836)
DNA (2190bp) protein (730aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENH7_BIFBS
Uncharacterized protein {ECO:0000313|EMBL:ADO52255.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
hypothetical protein
L2_040_124G1_scaffold_82_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19204..20154
DNA (951bp) protein (317aa)
Glycosyl transferase, family 2 n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENH6_BIFBS
family 2 glycosyl transferase
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ADO52254.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_82_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20227..22830)
DNA (2604bp) protein (868aa)
1,4-beta-N-acetylmuramidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENH5_BIFBS
1,4-beta-N-acetylmuramidase {ECO:0000313|EMBL:ADO52253.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
lytC; 1,4-beta-N-acetylmuramidase
L2_040_124G1_scaffold_82_19
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22946..23161
DNA (216bp) protein (72aa)
Acyltransferase 3 n=2 Tax=Bifidobacterium RepID=E3ENH4_BIFBS
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:CDB22824.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_040_124G1_scaffold_82_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23173..24210)
DNA (1038bp) protein (346aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HRF1_BIFBI
rmlB1; dTDP-glucose 4,6-dehydratase
L2_040_124G1_scaffold_82_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24386..24901)
DNA (516bp) protein (172aa)
Histidine kinase-related ATPase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M2N3_BIFBI
Histidine kinase-related ATPase {ECO:0000313|EMBL:EKF16271.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
two-component sensor kinase
L2_040_124G1_scaffold_82_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24870..25586)
DNA (717bp) protein (239aa)
Two-component response regulator n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCA1_9BIFI
Two-component response regulator {ECO:0000313|EMBL:CDB23043.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
two-component response regulator
L2_040_124G1_scaffold_82_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25834..26214)
DNA (381bp) protein (127aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WFH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52248.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_040_124G1_scaffold_82_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26355..27452
DNA (1098bp) protein (366aa)
trpS; TrpS Tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EFR51268.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EFR51268.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
TrpS Tryptophanyl-tRNA synthetase n=3 Tax=Bifidobacterium bifidum RepID=E4NY13_BIFBP
L2_040_124G1_scaffold_82_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27927..28946)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2MGG5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF16267.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_040_124G1_scaffold_82_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29505..29684
DNA (180bp) protein (60aa)
Putative metal-dependent hydrolase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFH6_BIFBI
putative metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AFL03639.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_040_124G1_scaffold_82_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29805..30614
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Bifidobacterium bifidum RepID=UPI0003183F80
Amidohydrolase family protein {ECO:0000313|EMBL:EFR51266.1}; Flags: Fragment;; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
putative metal-dependent hydrolase
L2_040_124G1_scaffold_82_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30687..32684)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFH5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03638.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_040_124G1_scaffold_82_29
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33095..35851
DNA (2757bp) protein (919aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Phosphoenolpyruvate carboxylase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GF91_9BIFI
phosphoenolpyruvate carboxylase
L2_040_124G1_scaffold_82_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36350..37636
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=3 Tax=Bifidobacterium bifidum RepID=E4VCE7_BIFBI
Inner membrane protein {ECO:0000313|EMBL:EKE50330.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
yhjX; inner membrane protein
Displaying items 1-30 of 85 in total

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