ggKbase home page

L2_040_124G1_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_132_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

412..1374
DNA (963bp) protein (321aa)
Taurine-binding periplasmic protein n=2 Tax=Escherichia coli RepID=L2VAD5_ECOLX
tauA; taurine transporter substrate binding subunit
Taurine-binding periplasmic protein {ECO:0000313|EMBL:ELC11487.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_124G1_scaffold_132_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1387..2154
DNA (768bp) protein (256aa)
tauB; tauB, subunit of taurine ABC transporter (EC:3.6.3.36)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
ABC transporter related n=81 Tax=Escherichia RepID=B1J078_ECOLC
L2_040_124G1_scaffold_132_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2151..2978
DNA (828bp) protein (276aa)
Taurine uptake ABC transporter, permease protein n=14 Tax=Escherichia coli RepID=B2NAD0_ECOLX
taurine transporter protein subunit TauC
Taurine transport system permease tauC {ECO:0000313|EMBL:EOV64746.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L2_040_124G1_scaffold_132_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2975..3826
DNA (852bp) protein (284aa)
taurine dioxygenase (EC:1.14.11.17)
Alpha-ketoglutarate-dependent taurine dioxygenase {ECO:0000313|EMBL:EMW25372.1}; EC=1.14.11.17 {ECO:0000313|EMBL:EMW25372.1};; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
Alpha-ketoglutarate-dependent taurine dioxygenase n=134 Tax=Escherichia RepID=TAUD_ECOLI
L2_040_124G1_scaffold_132_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3984..4958)
DNA (975bp) protein (325aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
Delta-aminolevulinic acid dehydratase n=43 Tax=Escherichia coli RepID=B2NAC8_ECOLX
L2_040_124G1_scaffold_132_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5481..8483
DNA (3003bp) protein (1001aa)
Outer membrane autotransporter barrel domain-containing protein n=2 Tax=Escherichia coli RepID=L2VAD9_ECOLX
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:ELC11492.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
outer membrane autotransporter
L2_040_124G1_scaffold_132_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8571..9194
DNA (624bp) protein (208aa)
Uncharacterized protein YaiV n=527 Tax=Enterobacteriaceae RepID=YAIV_ECO57
DNA-binding transcriptional regulator
Putative dNA-binding transcriptional regulator {ECO:0000313|EMBL:KDY97523.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L2_040_124G1_scaffold_132_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9195..10352)
DNA (1158bp) protein (386aa)
D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH n=597 Tax=Enterobacteriaceae RepID=AMPH_ECO57
ampH; beta-lactam binding protein AmpH
Beta-lactamase {ECO:0000313|EMBL:EII47970.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L2_040_124G1_scaffold_132_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10398..10499)
DNA (102bp) protein (34aa)
Uncharacterized protein n=213 Tax=Escherichia RepID=J7Q6B1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV82544.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_124G1_scaffold_132_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10704..11531
DNA (828bp) protein (276aa)
Transport protein (Fragment) n=2 Tax=Escherichia coli PF52_ECOLX">RepID=V6PF52_ECOLX
microcin B17 transporter
Protein sbmA {ECO:0000313|EMBL:EMV65154.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L2_040_124G1_scaffold_132_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11652..11924
DNA (273bp) protein (91aa)
Protein sbmA n=1 Tax=Escherichia coli 2788150 RepID=M8ZY72_ECOLX
sbmA; transporter
Transport protein {ECO:0000313|EMBL:EIH42630.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L2_040_124G1_scaffold_132_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11937..13031
DNA (1095bp) protein (365aa)
Predicted DNA-binding transcriptional regulator n=424 Tax=Escherichia RepID=C8U264_ECO10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX35855.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L2_040_124G1_scaffold_132_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13090..13398)
DNA (309bp) protein (103aa)
Inner membrane protein YaiY n=1293 Tax=Enterobacteriaceae RepID=YAIY_ECO57
hypothetical protein
Inner membrane protein yaiY {ECO:0000313|EMBL:EOV97040.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L2_040_124G1_scaffold_132_14
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13658..13870
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Shigella dysenteriae RepID=Q32JC7_SHIDS
yaiZ; putative membrane protein YaiZ
Putative membrane protein {ECO:0000313|EMBL:EIQ35087.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L2_040_124G1_scaffold_132_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13894..14988)
DNA (1095bp) protein (365aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
D-alanine--D-alanine ligase A n=830 Tax=Enterobacteriaceae RepID=DDLA_ECO57
L2_040_124G1_scaffold_132_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15451..15711
DNA (261bp) protein (87aa)
Anti-adapter protein IraP n=861 Tax=Enterobacteriaceae RepID=IRAP_ECO24
hypothetical protein
Anti-adapter protein IraP {ECO:0000256|HAMAP-Rule:MF_01198}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_040_124G1_scaffold_132_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15812..17227
DNA (1416bp) protein (472aa)
Alkaline phosphatase n=5 Tax=Escherichia coli RepID=L2V7M1_ECOLX
Alkaline phosphatase {ECO:0000313|EMBL:ESK03116.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
alkaline phosphatase
L2_040_124G1_scaffold_132_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17346..17666
DNA (321bp) protein (107aa)
Phosphate starvation-inducible protein PsiF n=1242 Tax=Enterobacteriaceae RepID=PSIF_ECOL6
PsiF repeat protein
PsiF repeat protein {ECO:0000313|EMBL:ESA82020.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L2_040_124G1_scaffold_132_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17768..18883
DNA (1116bp) protein (372aa)
Protein AdrA n=506 Tax=Enterobacteriaceae RepID=ADRA_ECOL6
adrA; diguanylate cyclase AdrA
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFK70786.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
L2_040_124G1_scaffold_132_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18900..19709)
DNA (810bp) protein (270aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Pyrroline-5-carboxylate reductase n=603 Tax=Enterobacteriaceae RepID=P5CR_ECOLI
L2_040_124G1_scaffold_132_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19829..20293
DNA (465bp) protein (155aa)
UPF0178 protein YaiI n=161 Tax=Enterobacteriaceae RepID=YAII_ECOLC
hypothetical protein
UPF0178 protein YaiI {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_040_124G1_scaffold_132_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20470..20994
DNA (525bp) protein (175aa)
aroL; shikimate kinase II (EC:2.7.1.71)
Shikimate kinase 2 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003442}; Short=SK 2 {ECO:0000256|HAMAP-Rule:MF_01269};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003395};; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
Shikimate kinase 2 n=1193 Tax=Enterobacteriaceae RepID=AROL_ECO24
L2_040_124G1_scaffold_132_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21044..21235
DNA (192bp) protein (64aa)
Uncharacterized protein YaiA n=1166 Tax=Enterobacteriaceae RepID=YAIA_ECO57
yaiA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD89589.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_040_124G1_scaffold_132_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21493..22170
DNA (678bp) protein (226aa)
Protein of aro operon, regulated by aroR n=143 Tax=Escherichia coli RepID=J7Q6B6_ECOLX
aroM; hypothetical protein
AroM protein {ECO:0000313|EMBL:ESD76000.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
L2_040_124G1_scaffold_132_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22242..22526
DNA (285bp) protein (95aa)
UPF0345 protein YaiE n=1379 Tax=Enterobacteriaceae RepID=YAIE_ECO24
hypothetical protein
UPF0345 protein YaiE {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L2_040_124G1_scaffold_132_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22694..22813)
DNA (120bp) protein (40aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=T7K359_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL43898.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L2_040_124G1_scaffold_132_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23174..24151)
DNA (978bp) protein (326aa)
Recombination-associated protein rdgC n=3 Tax=Escherichia coli RepID=R8XHY1_ECOLX
rdgC; Recombination-associated protein rdgC
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L2_040_124G1_scaffold_132_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24210..25118
DNA (909bp) protein (303aa)
Fructokinase {ECO:0000313|EMBL:EMX55006.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EMX55006.1};; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
Manno(Fructo)kinase n=141 Tax=Escherichia coli RepID=A7ZX43_ECOHS
mak; fructokinase
L2_040_124G1_scaffold_132_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25365..26633)
DNA (1269bp) protein (423aa)
Protein AraJ n=2 Tax=Escherichia coli RepID=L2VAF7_ECOLX
Protein AraJ {ECO:0000313|EMBL:ELC11512.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
araJ; MFS transport protein AraJ
L2_040_124G1_scaffold_132_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26675..29821)
DNA (3147bp) protein (1049aa)
Nuclease sbcCD subunit C n=2 Tax=Escherichia coli RepID=L2V8E1_ECOLX
Nuclease sbcCD subunit C {ECO:0000313|EMBL:ESK03104.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
exonuclease subunit SbcC
Displaying items 1-30 of 155 in total

View Taxonomy