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L2_040_124G1_scaffold_180

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_180_1
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1011
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SGN3_CITFR
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAL49499.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
sugar ABC transporter ATP-binding protein
L2_040_124G1_scaffold_180_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1029..2096
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1M8M6_9ENTR
Sugar ABC transporter permease {ECO:0000313|EMBL:AKE58100.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
sugar ABC transporter permease
L2_040_124G1_scaffold_180_3
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2150..2947
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1M8M5_9ENTR
Putative oxidoreductase {ECO:0000313|EMBL:GAL49501.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
budC; acetoin reductase
L2_040_124G1_scaffold_180_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2983..3768
DNA (786bp) protein (262aa)
Putative short-chain dehydrogenase/reductase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TML5_CITRI
Short-chain dehydrogenase {ECO:0000313|EMBL:KEY47870.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
short-chain dehydrogenase/reductase
L2_040_124G1_scaffold_180_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3878..4030)
DNA (153bp) protein (51aa)
Putative host cell-killing modulation protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TML4_CITRI
Membrane protein {ECO:0000313|EMBL:AKE58097.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hokE1; host cell-killing modulation protein
L2_040_124G1_scaffold_180_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4257..6290)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJM7_CITK8
Choline transporter {ECO:0000313|EMBL:AKE58096.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
choline transport protein BetT
L2_040_124G1_scaffold_180_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6418..7008
DNA (591bp) protein (197aa)
HTH-type transcriptional regulator BetI n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJM8_CITK8
HTH-type transcriptional regulator BetI {ECO:0000256|HAMAP-Rule:MF_00768}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
transcriptional regulator BetI
L2_040_124G1_scaffold_180_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7026..8498
DNA (1473bp) protein (491aa)
NAD/NADP-dependent betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00804}; Short=BADH {ECO:0000256|HAMAP-Rule:MF_00804};; EC=1.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00804};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
NAD/NADP-dependent betaine aldehyde dehydrogenase n=14 Tax=Escherichia coli RepID=C8UIA3_ECO1A
betB; betaine aldehyde dehydrogenase, NAD-dependent
L2_040_124G1_scaffold_180_9
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8512..10188
DNA (1677bp) protein (559aa)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Oxygen-dependent choline dehydrogenase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=BETA_CITK8
choline dehydrogenase
L2_040_124G1_scaffold_180_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10232..10930)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TML0_CITRI
GCN5 family acetyltransferase {ECO:0000313|EMBL:AKE58092.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_180_11
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11073..12188
DNA (1116bp) protein (372aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
ybdK; carboxylate-amine ligase (EC:6.3.-.-)
Carboxylate-amine ligase ROD_05731 n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMK9_CITRI
L2_040_124G1_scaffold_180_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12258..12506
DNA (249bp) protein (83aa)
Putative exported protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMK8_CITRI
Membrane protein {ECO:0000313|EMBL:AKE58090.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_180_13
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12435..14060)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJN4_CITK8
Enterochelin esterase {ECO:0000313|EMBL:KGY17254.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
hypothetical protein
L2_040_124G1_scaffold_180_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14195..14536)
DNA (342bp) protein (114aa)
Transcriptional activator RamA n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMK7_CITRI
Transcriptional activator RamA {ECO:0000313|EMBL:GAL49511.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
transcriptional regulator
L2_040_124G1_scaffold_180_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14533..15666)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJN8_CITK8
Beta-lactamase {ECO:0000313|EMBL:AKE58088.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_180_16
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15859..16440
DNA (582bp) protein (194aa)
Putative tetR-family transcriptional regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMK6_CITRI
Transcriptional repressor RamR {ECO:0000313|EMBL:GAL49513.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
TetR family transcriptional regulator
L2_040_124G1_scaffold_180_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16440..16808
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMK5_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL49514.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L2_040_124G1_scaffold_180_18
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16907..17560
DNA (654bp) protein (218aa)
nfnB; oxygen-insensitive NAD(P)H nitroreductase (EC:1.5.1.34)
Oxygen-insensitive NAD(P)H nitroreductase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMK4_CITRI
Nitroreductase NfnB {ECO:0000313|EMBL:GAL49515.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L2_040_124G1_scaffold_180_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17636..18883
DNA (1248bp) protein (416aa)
Putative mechanosensitive ion channel protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TMK3_CITRI
Miniconductance mechanosensitive channel {ECO:0000313|EMBL:GAL49516.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
mechanosensitive ion channel protein
L2_040_124G1_scaffold_180_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18885..19856)
DNA (972bp) protein (324aa)
LacI family transcriptional regulator n=2 Tax=Enterobacter cloacae complex RepID=U7CIM9_9ENTR
Cytochrome C peroxidase {ECO:0000313|EMBL:AKE58083.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cytochrome C peroxidase
L2_040_124G1_scaffold_180_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19932..21098)
DNA (1167bp) protein (389aa)
dehydrogenase n=1 Tax=Enterobacter mori RepID=UPI000237C73F
Dehydrogenase {ECO:0000313|EMBL:AKE58082.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
oxidoreductase domain-containing protein
L2_040_124G1_scaffold_180_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21067..22092)
DNA (1026bp) protein (342aa)
Inosose dehydratase n=1 Tax=Enterobacter sp. SST3 RepID=K4YRR2_9ENTR
AP endonuclease {ECO:0000313|EMBL:AKE58081.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
AP endonuclease
L2_040_124G1_scaffold_180_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22108..23346)
DNA (1239bp) protein (413aa)
Nucleoside transporter n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZGC5_9ENTR
Major facilitator transporter {ECO:0000313|EMBL:AKE58080.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
yegT; nucleoside transporter yegT
L2_040_124G1_scaffold_180_24
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23537..24925)
DNA (1389bp) protein (463aa)
UPI0003A0962E related cluster n=1 Tax=unknown RepID=UPI0003A0962E
Aromatic amino acid transporter {ECO:0000313|EMBL:AKE58077.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
phenylalanine transporter
L2_040_124G1_scaffold_180_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25042..27225)
DNA (2184bp) protein (728aa)
TonB-dependent siderophore receptor n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZGC1_9ENTR
Putative TonB-dependent outer membrane receptor {ECO:0000313|EMBL:GAL49522.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
TonB-dependent siderophore receptor
L2_040_124G1_scaffold_180_26
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27289..28374)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1M8K9_9ENTR
Periplasmic protein {ECO:0000313|EMBL:AKE58075.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_180_27
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28673..29848
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJQ3_CITK8
DNA repair protein {ECO:0000313|EMBL:AKE58074.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_180_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30360..30932
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SGL2_CITFR
Uncharacterized protein {ECO:0000313|EMBL:AKE58073.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
LuxR family transcriptional regulator
L2_040_124G1_scaffold_180_29
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31130..32134
DNA (1005bp) protein (335aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BCR3_9ENTR
Transporter {ECO:0000313|EMBL:AKE58072.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
transporter
L2_040_124G1_scaffold_180_30
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32442..40442
DNA (8001bp) protein (2667aa)
Outer membrane autotransporter barrel domain-containing protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DHK3_CITFR
Transporter {ECO:0000313|EMBL:AKE58072.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
transporter
Displaying items 1-30 of 47 in total

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