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L2_040_124G1_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_181_1
unknown

Not on your lists

1..72
DNA (72bp) protein (24aa)

This feature has no annotations

L2_040_124G1_scaffold_181_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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88..1632
DNA (1545bp) protein (515aa)
Diguanylate cyclase domain protein n=72 Tax=Clostridium difficile RepID=T3PTX7_CLODI
Putative diguanylate kinase signaling protein {ECO:0000313|EMBL:CCL21761.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative diguanylate kinase signaling protein
L2_040_124G1_scaffold_181_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1808..2176
DNA (369bp) protein (123aa)
Bacterial regulatory s, gntR family protein n=180 Tax=Clostridium difficile RepID=C9XPS3_CLODC
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:CKH08413.1}; Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDT04712.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_040_124G1_scaffold_181_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2178..2903
DNA (726bp) protein (242aa)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CAJ68483.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ68483.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein n=190 Tax=Clostridium difficile RepID=C9XPS4_CLODC
ABC transporter ATP-binding protein
L2_040_124G1_scaffold_181_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2897..3661
DNA (765bp) protein (255aa)
ABC-type transport system, multidrug-family permease n=198 Tax=Clostridium difficile RepID=Q186H5_CLOD6
ABC transporter permease
ABC-type transport system, multidrug-family permease {ECO:0000313|EMBL:CCL21764.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_181_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3883..5133
DNA (1251bp) protein (417aa)
Major Facilitator Superfamily protein n=88 Tax=Clostridium difficile RepID=T3H565_CLODC
Transporter, Major Facilitator Superfamily(MFS)
Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CCL21765.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_181_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5324..6208
DNA (885bp) protein (295aa)
Mechanosensitive ion channel family protein n=102 Tax=Clostridium difficile RepID=T3HA05_CLODC
putative mechanosensitive ion channelprotein,MscS family
Putative mechanosensitive ion channel protein,MscS family {ECO:0000313|EMBL:CAJ68486.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_040_124G1_scaffold_181_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6329..6472
DNA (144bp) protein (48aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2TIN9_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CKH08542.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L2_040_124G1_scaffold_181_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6570..7187
DNA (618bp) protein (206aa)
Peptidase propeptide and YPEB domain protein n=104 Tax=Clostridium difficile RepID=T3HAE9_CLODC
peptidase propeptide and ypeb domain protein
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EQH99292.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_040_124G1_scaffold_181_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7295..9826
DNA (2532bp) protein (844aa)
Flavo-diiron FprA1 domain protein {ECO:0000313|EMBL:EQI85000.1}; EC=1.6.3.- {ECO:0000313|EMBL:EQI85000.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Flavo-diiron FprA1 domain protein n=34 Tax=Clostridium difficile RepID=T2V9Q6_CLODI
nitric oxide reductase flavoprotein
L2_040_124G1_scaffold_181_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10260..10961
DNA (702bp) protein (234aa)
Response regulator n=177 Tax=Clostridium difficile RepID=T3H6Q8_CLODC
vanR; two-component response regulator
Response regulator {ECO:0000313|EMBL:EQG75794.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_181_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11026..12093
DNA (1068bp) protein (356aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Two-component sensor histidine kinase n=61 Tax=Clostridium difficile RepID=C9XPZ2_CLODC
vanS; two-component sensor histidine kinase
L2_040_124G1_scaffold_181_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12354..13454
DNA (1101bp) protein (367aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
D-alanine--D-alanine ligase n=74 Tax=Clostridium difficile RepID=T2VBW1_CLODI
vanG; vancomycin/teicoplanin A-type resistance protein
L2_040_124G1_scaffold_181_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13451..14257
DNA (807bp) protein (269aa)
D-alanyl-D-alanine carboxypeptidase n=195 Tax=Clostridium difficile RepID=Q186I1_CLOD6
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EQH99297.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_040_124G1_scaffold_181_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14275..16413
DNA (2139bp) protein (713aa)
Alanine racemase 1 {ECO:0000313|EMBL:CAJ68493.1}; EC=5.1.1.1 {ECO:0000313|EMBL:CAJ68493.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Alanine racemase n=51 Tax=Clostridium difficile RepID=C9XQ58_CLODC
serine/alanine racemase
L2_040_124G1_scaffold_181_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16727..17347
DNA (621bp) protein (207aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=Q186I5_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65707.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_181_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17523..18092)
DNA (570bp) protein (190aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=T2VXL1_CLODI
membrane-associated metal-dependent hydrolase
Putative membrane-associated metal-dependent hydrolase {ECO:0000313|EMBL:CBE04153.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_040_124G1_scaffold_181_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18172..18876)
DNA (705bp) protein (235aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Superoxide dismutase n=190 Tax=Clostridium difficile RepID=C9XQ61_CLODC
sodA; superoxide dismutase
L2_040_124G1_scaffold_181_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19049..20923
DNA (1875bp) protein (625aa)
Asparagine synthetase {ECO:0000313|EMBL:CAJ68497.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CAJ68497.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
asnB; asparagine synthetase (EC:6.3.5.4)
Asparagine synthetase n=166 Tax=Clostridium difficile RepID=T3HAC6_CLODC
L2_040_124G1_scaffold_181_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21015..22451)
DNA (1437bp) protein (479aa)
Trypsin family protein n=2 Tax=Clostridium difficile RepID=T4PL22_CLODI
Trypsin family protein {ECO:0000313|EMBL:EQH99303.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
serine protease
L2_040_124G1_scaffold_181_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22780..23358
DNA (579bp) protein (193aa)
General stress protein 16U n=216 Tax=Clostridium difficile RepID=C9XQD4_CLODC
tellurium resistance protein
Bacterial stress protein {ECO:0000313|EMBL:EFH06347.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L2_040_124G1_scaffold_181_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23397..23975
DNA (579bp) protein (193aa)
Bacterial stress family protein n=187 Tax=Clostridium difficile RepID=T3H6H3_CLODC
terD; Tellurium resistance protein
Tellurium resistance protein {ECO:0000313|EMBL:CCL21789.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_181_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24061..24690
DNA (630bp) protein (210aa)
Stress response protein SCP2 n=203 Tax=Clostridium difficile RepID=C9XQD6_CLODC
tellurium resistance protein
Bacterial stress protein {ECO:0000313|EMBL:EHJ26353.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_040_124G1_scaffold_181_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24680..27439
DNA (2760bp) protein (920aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EQH99307.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EQH99307.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Calcium-translocating P-type ATPase, PMCA-type n=18 Tax=Clostridium difficile RepID=T2WI26_CLODI
calcium-transporting ATPase
L2_040_124G1_scaffold_181_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27526..29088
DNA (1563bp) protein (521aa)
Uncharacterized protein n=127 Tax=Clostridium difficile RepID=G6BY48_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI84970.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
conserved hypothetical protein
L2_040_124G1_scaffold_181_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29089..30225
DNA (1137bp) protein (379aa)
Toxic anion resistance protein TelA n=210 Tax=Clostridium difficile RepID=G6BB85_CLODI
tellurite resistance protein
Toxic anion resistance family protein {ECO:0000313|EMBL:EQE65723.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_181_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30289..31365
DNA (1077bp) protein (359aa)
Uncharacterized protein n=47 Tax=Clostridium difficile RepID=T3H6H7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65714.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_181_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31343..32581
DNA (1239bp) protein (413aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T3ENK7_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68506.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_040_124G1_scaffold_181_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32635..33723
DNA (1089bp) protein (363aa)
Uncharacterized protein n=77 Tax=Clostridium difficile RepID=G6BY44_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE65706.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L2_040_124G1_scaffold_181_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33751..34542
DNA (792bp) protein (264aa)
Haloacid dehalogenase-like hydrolase family protein n=88 Tax=Clostridium difficile RepID=T2U1B7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL21797.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
Displaying items 1-30 of 47 in total

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