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L2_040_124G1_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_187_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1339
DNA (1338bp) protein (446aa)
malL; oligo-1,6-glucosidase 1 (EC:3.2.1.10)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium breve RepID=F6C5K0_BIFBA
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:AEF28025.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_040_124G1_scaffold_187_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1544..1750
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJC3_BIFBR
transposase
Uncharacterized protein {ECO:0000313|EMBL:EPD76873.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_040_124G1_scaffold_187_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1853..3472
DNA (1620bp) protein (540aa)
ABC transporter, substrate-binding protein, family 5 n=4 Tax=Bifidobacterium breve RepID=F6C5J8_BIFBA
ABC transporter substrate binding component {ECO:0000313|EMBL:BAQ99524.1}; ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFE89059.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ABC transporter substrate-binding protein
L2_040_124G1_scaffold_187_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3474..3965
DNA (492bp) protein (164aa)
Putative peptide-methionine (S)-S-oxide reductase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E656_BIFBR
Peptide methionine sulfoxide reductase msrA/msrB
Peptide methionine sulfoxide reductase msrA/msrB {ECO:0000313|EMBL:AHJ20737.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_187_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4661..5473
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBP8_BIFBR
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87919.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_187_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5485..6780
DNA (1296bp) protein (432aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S3A3S3_BIFBR
Conserved hypothetical membrane spanning protein, possibly ABC-type permease
Uncharacterized protein {ECO:0000313|EMBL:EPD76877.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_040_124G1_scaffold_187_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6792..8321
DNA (1530bp) protein (510aa)
Permease protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9XXL1_BIFBU
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:ABE95260.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_040_124G1_scaffold_187_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8305..10356)
DNA (2052bp) protein (684aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
dxs; 1-deoxy-D-xylulose 5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose 5-phosphate synthase n=2 Tax=Bifidobacterium breve RepID=F9XXL2_BIFBU
L2_040_124G1_scaffold_187_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10610..11602
DNA (993bp) protein (331aa)
adh3; Alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:ABE95262.1}; EC=1.1.1.1 {ECO:0000313|EMBL:ABE95262.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Alcohol dehydrogenase n=2 Tax=Bifidobacterium breve RepID=F9XXL3_BIFBU
L2_040_124G1_scaffold_187_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11669..12169
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=3 Tax=Bifidobacterium breve RepID=F9XXL4_BIFBU
Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit
L2_040_124G1_scaffold_187_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12153..13331
DNA (1179bp) protein (393aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=3 Tax=Bifidobacterium breve RepID=F6C5I9_BIFBA
Phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit
L2_040_124G1_scaffold_187_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13340..13768
DNA (429bp) protein (143aa)
Ferric uptake regulation protein n=5 Tax=Bifidobacterium breve RepID=F9XXL6_BIFBU
Ferric uptake regulation protein
Ferric uptake regulation protein {ECO:0000313|EMBL:ABE95265.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_040_124G1_scaffold_187_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13815..14525)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E648_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87911.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Permease protein of ABC transporter system
L2_040_124G1_scaffold_187_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14522..14941)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTP8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87910.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Permease protein of ABC transporter system
L2_040_124G1_scaffold_187_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15013..15696
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CV24_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:CEF10034.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
hypothetical protein
L2_040_124G1_scaffold_187_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15819..16121)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1E4_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87907.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_187_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16470..16967)
DNA (498bp) protein (166aa)
Transcriptional regulator, Fur family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E644_BIFBR
Transcriptional regulator, Fur family {ECO:0000313|EMBL:ERI87906.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Ferric uptake regulation protein
L2_040_124G1_scaffold_187_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17226..17981)
DNA (756bp) protein (252aa)
TIGR03943 family protein n=3 Tax=Bifidobacterium breve RepID=D4BN39_BIFBR
putative membrane spanning protein
TIGR03943 family protein {ECO:0000313|EMBL:ERI87905.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_187_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17984..19111)
DNA (1128bp) protein (376aa)
Putative permease n=2 Tax=Bifidobacterium breve RepID=F6C5I2_BIFBA
putative permease
Putative permease {ECO:0000313|EMBL:AEF27650.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_040_124G1_scaffold_187_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19292..19651)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E82ABD
Solute-binding protein of ABC transporter system for metals
Solute-binding protein of ABC transporter system for metals {ECO:0000313|EMBL:AHJ20752.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_187_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19833..20000)
DNA (168bp) protein (56aa)
50S ribosomal protein L32 n=2 Tax=Bifidobacterium breve RepID=F6C5I1_BIFBA
ribosomal protein L32-like protein
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_187_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20000..20122)
DNA (123bp) protein (41aa)
50S ribosomal protein L36 n=3 Tax=Bifidobacterium RepID=B7GU91_BIFLS
rpmJ_1; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_040_124G1_scaffold_187_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20172..20429)
DNA (258bp) protein (86aa)
50S ribosomal protein L31 type B n=3 Tax=Bifidobacterium RepID=RL31B_BIFLS
rpmE_1; 50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_040_124G1_scaffold_187_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20556..20861)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=3 Tax=Bifidobacterium RepID=B7GU89_BIFLS
rpsN_1; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_187_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(21080..21250)
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=3 Tax=Bifidobacterium RepID=B7GU88_BIFLS
rpmG_1; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_187_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(21421..21657)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=3 Tax=Bifidobacterium RepID=B7GU87_BIFLS
ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_040_124G1_scaffold_187_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21708..22478
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C5H5_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26579.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_040_124G1_scaffold_187_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22818..23741
DNA (924bp) protein (308aa)
ABC transporter, substrate-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C5H4_BIFBA
Solute binding protein of ABC transporter system
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AEF26333.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_040_124G1_scaffold_187_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24036..26111
DNA (2076bp) protein (692aa)
arylsulfatase (EC:3.1.6.-)
Arylsulfatase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBS0_BIFBR
Arylsulfatase {ECO:0000313|EMBL:ERI87944.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_187_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26230..27789
DNA (1560bp) protein (520aa)
Aldehyde dehydrogenase n=2 Tax=Bifidobacterium breve RepID=F6C5H2_BIFBA
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
aldehyde dehydrogenase (NAD) domain protein
Displaying items 1-30 of 55 in total

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