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L2_040_124G1_scaffold_190

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_190_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1290)
DNA (1290bp) protein (430aa)
gpi; Glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glucose-6-phosphate isomerase n=5 Tax=Bifidobacterium breve RepID=F6C7G8_BIFBA
L2_040_124G1_scaffold_190_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2165..3166
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZQX6_BIFBR
putative membrane spanning protein with auxin efflux carrier domain
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERI87418.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_190_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3292..4065)
DNA (774bp) protein (258aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAA2_BIFBR
Hypothetical protein with HAM1 family domain
L2_040_124G1_scaffold_190_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4187..4963)
DNA (777bp) protein (259aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Ribonuclease PH n=5 Tax=Bifidobacterium breve RepID=F6C7G5_BIFBA
Ribonuclease PH
L2_040_124G1_scaffold_190_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5501..6823)
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4U5_BIFBR
Nicotinate phosphoribosyltransferase
L2_040_124G1_scaffold_190_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6931..7557
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=H3KZJ1_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20606.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_190_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7565..7993)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=3 Tax=Bifidobacterium breve RepID=F6C7G2_BIFBA
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AHJ18681.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_040_124G1_scaffold_190_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8252..9262
DNA (1011bp) protein (337aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAA7_BIFBR
Oxidoreductase
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERI87424.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_190_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9458..9742)
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C7G0_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:BAQ99375.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein
L2_040_124G1_scaffold_190_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9844..10344
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phosphopantetheine adenylyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C7F9_BIFBA
Phosphopantetheine adenylyltransferase
L2_040_124G1_scaffold_190_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10350..11135
DNA (786bp) protein (262aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7F8_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26832.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_040_124G1_scaffold_190_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11251..11871
DNA (621bp) protein (207aa)
Putative ACR n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTN8_BIFBR
Putative ACR {ECO:0000313|EMBL:ERI87428.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_040_124G1_scaffold_190_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11961..12155
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=6 Tax=Bifidobacterium breve RepID=F6C7F6_BIFBA
LSU ribosomal protein L32P
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_190_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12326..13069
DNA (744bp) protein (248aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribonuclease 3 n=6 Tax=Bifidobacterium breve RepID=F6C7F5_BIFBA
L2_040_124G1_scaffold_190_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13229..15193
DNA (1965bp) protein (655aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:BAQ99369.1}; Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EFE90007.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFE90007.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Acetolactate synthase, large subunit, biosynthetic type n=2 Tax=Bifidobacterium breve RepID=D4BMI8_BIFBR
Acetolactate synthase large subunit
L2_040_124G1_scaffold_190_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15210..15767
DNA (558bp) protein (186aa)
acetolactate synthase n=1 Tax=Bifidobacterium breve RepID=UPI0002F7EFDC
Acetolactate synthase small subunit {ECO:0000313|EMBL:BAQ99368.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Acetolactate synthase small subunit
L2_040_124G1_scaffold_190_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15935..16213
DNA (279bp) protein (93aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=6 Tax=Bifidobacterium breve RepID=F6C7F2_BIFBA
Hypothetical protein
Plasmid stabilization protein {ECO:0000313|EMBL:BAQ99367.1}; Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE90005.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_040_124G1_scaffold_190_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16223..16645
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Ribonuclease VapC n=4 Tax=Bifidobacterium breve RepID=D4BMI4_BIFBR
Plasmid stability protein
L2_040_124G1_scaffold_190_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16786..18999)
DNA (2214bp) protein (738aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4V7_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87436.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-binding protein of ABC transporter system
L2_040_124G1_scaffold_190_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19215..19991)
DNA (777bp) protein (259aa)
Class I glutamine amidotransferase n=3 Tax=Bifidobacterium breve RepID=F6C7E9_BIFBA
Class I glutamine amidotransferase {ECO:0000313|EMBL:ERI87437.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
class I glutamine amidotransferase
L2_040_124G1_scaffold_190_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20154..21803
DNA (1650bp) protein (550aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTP6_BIFBR
L2_040_124G1_scaffold_190_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22052..22960)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAC0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87439.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein in cation efflux family
L2_040_124G1_scaffold_190_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23315..24970
DNA (1656bp) protein (552aa)
Signal recognition particle protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CSD1_BIFBR
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Signal recognition particle, subunit FFH/SRP54
L2_040_124G1_scaffold_190_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25222..26553
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVK5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88585.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein
L2_040_124G1_scaffold_190_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26773..27246
DNA (474bp) protein (158aa)
30S ribosomal protein S16 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E7W9_BIFBR
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
SSU ribosomal protein S16P
L2_040_124G1_scaffold_190_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27270..27503
DNA (234bp) protein (78aa)
UPF0109 protein Bbr_0380 n=5 Tax=Bifidobacterium breve RepID=F9Y1H8_BIFBU
RNA binding protein
UPF0109 protein BBBR_0319 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_040_124G1_scaffold_190_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27526..28140
DNA (615bp) protein (205aa)
Ribosome maturation factor RimM n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CWZ2_BIFBR
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
16S rRNA processing protein rimM
L2_040_124G1_scaffold_190_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28214..29269)
DNA (1056bp) protein (352aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CDL1_BIFBR
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:ERI88589.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Inosine-uridine preferring nucleoside hydrolase
L2_040_124G1_scaffold_190_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29537..30400)
DNA (864bp) protein (288aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bifidobacterium breve RepID=U2CVL1_BIFBR
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERI88590.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Oxidoreductase, aldo/keto reductase family
L2_040_124G1_scaffold_190_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30555..30725)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E7X4_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI88591.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Displaying items 1-30 of 53 in total

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