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L2_040_124G1_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_201_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..105)
DNA (105bp) protein (35aa)
Reverse rubrerythrin-1 n=1 Tax=Clostridium difficile DA00273 RepID=T3XYF1_CLODI
ruberythrin
Putative rubrerythrin {ECO:0000313|EMBL:CAJ68389.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_040_124G1_scaffold_201_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(223..2046)
DNA (1824bp) protein (608aa)
ABC transporter family protein n=95 Tax=Clostridium difficile RepID=T2T6I6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQI96561.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
ABC transporter ATP-binding protein/permease
L2_040_124G1_scaffold_201_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2059..3834)
DNA (1776bp) protein (592aa)
multidrug family ABC transporter ATP-binding protein/permease (EC:3.6.3.-)
ABC transporter family protein n=118 Tax=Clostridium difficile RepID=T2T8V0_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQI00476.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_040_124G1_scaffold_201_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4135..6354
DNA (2220bp) protein (740aa)
YhgE/Pip N-terminal domain protein n=142 Tax=Clostridium difficile RepID=T2TME6_CLODI
Putative membrane protein {ECO:0000313|EMBL:CCL21593.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
membrane protein ( phage infection protein)
L2_040_124G1_scaffold_201_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6592..6891)
DNA (300bp) protein (100aa)
Rhodanese-like domain protein n=190 Tax=Clostridium difficile RepID=T3HDZ6_CLODC
putative rhodanese-like domain-containingprotein
Rhodanese-like domain protein {ECO:0000313|EMBL:EQI85643.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_040_124G1_scaffold_201_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7098..10139
DNA (3042bp) protein (1014aa)
Beta-lactamase family protein n=44 Tax=Clostridium difficile RepID=T3HJE1_CLODC
Beta-lactamase family protein {ECO:0000313|EMBL:EQI85642.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
cell surface protein penicillin-binding protein
L2_040_124G1_scaffold_201_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10300..11541)
DNA (1242bp) protein (414aa)
4Fe-4S binding domain protein n=174 Tax=Clostridium difficile RepID=T3HJG1_CLODC
iron-sulfur protein
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQI00472.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_040_124G1_scaffold_201_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11795..14356)
DNA (2562bp) protein (854aa)
FtsX-like permease family protein n=11 Tax=Clostridium difficile RepID=T2Z092_CLODI
ABC-type transport system, permease protein {ECO:0000313|EMBL:CCL21589.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC transporter permease
L2_040_124G1_scaffold_201_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14357..15034)
DNA (678bp) protein (226aa)
ABC transporter family protein n=172 Tax=Clostridium difficile RepID=C9XSY8_CLODC
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EQG77608.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_201_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15114..16358)
DNA (1245bp) protein (415aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Two-component sensor histidine kinase n=1 Tax=Clostridium difficile E19 RepID=U3YG60_CLODI
two-component sensor kinase
L2_040_124G1_scaffold_201_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16345..17049)
DNA (705bp) protein (235aa)
Transcriptional regulatory family protein n=176 Tax=Clostridium difficile RepID=T3HKC8_CLODC
Two-component response regulator
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQG78061.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_201_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17334..17780)
DNA (447bp) protein (149aa)
Uncharacterized protein n=134 Tax=Clostridium difficile RepID=T2TLC9_CLODI
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21585.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_201_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17972..18361
DNA (390bp) protein (130aa)
Bacterial regulatory s, gntR family protein n=3 Tax=Clostridium difficile RepID=T2UWI7_CLODI
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQE66624.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_201_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18354..19445
DNA (1092bp) protein (364aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T3EKM9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66611.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative membrane protein
L2_040_124G1_scaffold_201_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19565..20041
DNA (477bp) protein (159aa)
Uncharacterized protein n=196 Tax=Clostridium difficile RepID=G6B9W9_CLODI
putative phosphohydrolase, HD superfamily
HD domain protein {ECO:0000313|EMBL:EQE66592.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_201_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20427..20894
DNA (468bp) protein (156aa)
Pyridoxamine 5'-phosphate oxidase family protein n=206 Tax=Clostridium difficile RepID=T2TMI5_CLODI
5-nitroimidazole reductase
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EQI85731.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_040_124G1_scaffold_201_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20954..21529)
DNA (576bp) protein (192aa)
Flavin reductase n=54 Tax=Clostridium difficile RepID=G6BWR7_CLODI
Putative flavodoxin protein {ECO:0000313|EMBL:CCL21573.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
wrbA; flavoprotein
L2_040_124G1_scaffold_201_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21589..22686)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=149 Tax=Clostridium difficile RepID=U3W909_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68322.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_040_124G1_scaffold_201_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22700..23389)
DNA (690bp) protein (230aa)
Uncharacterized protein n=169 Tax=Clostridium difficile RepID=T3HKY7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQI85728.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_040_124G1_scaffold_201_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23554..24720)
DNA (1167bp) protein (389aa)
RNA polymerase sigma factor SigA n=213 Tax=Clostridium difficile RepID=C9XSQ7_CLODC
rpoD1; RNA polymerase sigma factor (sigma-43)
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_040_124G1_scaffold_201_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24738..26564)
DNA (1827bp) protein (609aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
DNA primase n=12 Tax=Clostridium difficile RepID=C9XSQ6_CLODC
dnaG; DNA primase
L2_040_124G1_scaffold_201_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26783..27568)
DNA (786bp) protein (262aa)
aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:CCK90250.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CCK90250.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=190 Tax=Clostridium difficile RepID=T3HJ61_CLODC
L2_040_124G1_scaffold_201_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27549..28055)
DNA (507bp) protein (169aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EQI00666.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EQI00666.1};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=35 Tax=Clostridium difficile RepID=T2UWH7_CLODI
L2_040_124G1_scaffold_201_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28048..28413)
DNA (366bp) protein (122aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=115 Tax=Clostridium difficile RepID=C9XSQ3_CLODC
Dihydroneopterin aldolase {ECO:0000313|EMBL:EHJ28719.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_040_124G1_scaffold_201_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28424..29215)
DNA (792bp) protein (264aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Dihydropteroate synthase n=158 Tax=Clostridium difficile RepID=T3HG74_CLODC
dihydropteroate synthase
L2_040_124G1_scaffold_201_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29279..29851)
DNA (573bp) protein (191aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
GTP cyclohydrolase 1 n=217 Tax=Clostridium difficile RepID=GCH1_CLOD6
L2_040_124G1_scaffold_201_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29877..30578)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P59 RepID=T4SUT3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDT21226.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L2_040_124G1_scaffold_201_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30612..31355)
DNA (744bp) protein (248aa)
Aminotransferase class IV family protein n=150 Tax=Clostridium difficile RepID=C9XRV6_CLODC
aminodeoxychorismate lyase
Aminotransferase class IV family protein {ECO:0000313|EMBL:EQE66619.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_201_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31345..32694)
DNA (1350bp) protein (450aa)
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:CCL21561.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CCL21561.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Aminodeoxychorismate synthase, component I n=16 Tax=Clostridium difficile RepID=T2UU27_CLODI
pabB; para-aminobenzoate synthase component I
L2_040_124G1_scaffold_201_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32696..33280)
DNA (585bp) protein (195aa)
pabA; Anthranilate synthase component II]; Para-aminobenzoate/anthranilate synthaseglutamine amidotransferase component II [Includes:Para-aminobenzoate synthase glutamine amidotransferasecomponent II (EC:2.6.1.85 4.1.3.27)
Glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein n=91 Tax=Clostridium difficile PF3_CLODI">RepID=T2TPF3_CLODI
Glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein {ECO:0000313|EMBL:EQE66607.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Displaying items 1-30 of 50 in total

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