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L2_040_124G1_scaffold_211

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_211_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32..325)
DNA (294bp) protein (98aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CCE6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88169.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_040_124G1_scaffold_211_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(991..1245)
DNA (255bp) protein (85aa)
YgiT-type zinc finger domain-containing protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZFJ8_BIFBR
YgiT-type zinc finger domain-containing protein {ECO:0000313|EMBL:EPD75131.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L2_040_124G1_scaffold_211_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1774..2619)
DNA (846bp) protein (282aa)
HAD hydrolase, family IIB n=2 Tax=Bifidobacterium breve RepID=F6C9M3_BIFBA
cof family hydrolase
HAD hydrolase, family IIB {ECO:0000313|EMBL:ERI88167.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_040_124G1_scaffold_211_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2715..3563)
DNA (849bp) protein (283aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9XZP8_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE95627.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_040_124G1_scaffold_211_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3757..5007)
DNA (1251bp) protein (417aa)
Glycogen synthase, Corynebacterium family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUE7_BIFBR
Glycogen synthase, Corynebacterium family {ECO:0000313|EMBL:ERI88165.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glycosyltransferase
L2_040_124G1_scaffold_211_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5136..5600)
DNA (465bp) protein (155aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DS90_BIFLD
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95625.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_040_124G1_scaffold_211_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5708..7603)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CVU2_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95624.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_040_124G1_scaffold_211_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7760..9400)
DNA (1641bp) protein (547aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E228_BIFBR
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI88162.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Solute binding protein of ABC transporter system for peptides
L2_040_124G1_scaffold_211_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10005..11108
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUE3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88160.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_040_124G1_scaffold_211_10
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11117..11734
DNA (618bp) protein (206aa)
Transcriptional regulator, LuxR family n=2 Tax=Bifidobacterium RepID=A7A3P8_BIFAD
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFI56710.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
response regulator
L2_040_124G1_scaffold_211_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11839..12135
DNA (297bp) protein (99aa)
Hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZP3_BIFBU
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19299.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_040_124G1_scaffold_211_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12147..12806
DNA (660bp) protein (220aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZB1_BIFAA
ribAB; 3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:BAF38794.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_040_124G1_scaffold_211_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12893..14431)
DNA (1539bp) protein (513aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CCD8_BIFBR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERI88159.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glutamate synthase [NADPH] small chain
L2_040_124G1_scaffold_211_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14433..19004)
DNA (4572bp) protein (1524aa)
Putative glutamate synthase [NADPH], large subunit n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVT6_BIFBR
Putative glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:ERI88158.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glutamate synthase [NADPH] large chain
L2_040_124G1_scaffold_211_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19273..19797
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZL92_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75140.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Transcriptional regulator, LacI family
L2_040_124G1_scaffold_211_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19811..20017
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9N1_BIFBA
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AHJ21106.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_211_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20064..21092)
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=5 Tax=Bifidobacterium breve RepID=F6C9N2_BIFBA
Transcriptional regulator, LacI family
Transcriptional regulator {ECO:0000313|EMBL:BAQ99933.1}; Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFE89506.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_040_124G1_scaffold_211_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21331..21459
DNA (129bp) protein (43aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C9N3_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75143.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_040_124G1_scaffold_211_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21802..23115)
DNA (1314bp) protein (438aa)
hemN; Coproporphyrinogen oxidase (NAD) (EC:1.3.1.-)
Coproporphyrinogen oxidase (NAD) n=2 Tax=Bifidobacterium breve RepID=F9XZN8_BIFBU
Uncharacterized protein {ECO:0000313|EMBL:EPD75144.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_040_124G1_scaffold_211_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23115..24995)
DNA (1881bp) protein (627aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Elongation factor 4 n=3 Tax=Bifidobacterium breve RepID=F6C9N5_BIFBA
GTP-binding protein lepA
L2_040_124G1_scaffold_211_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25142..25402
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=6 Tax=Bifidobacterium breve RepID=F6C9N6_BIFBA
SSU ribosomal protein S20P
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_040_124G1_scaffold_211_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25653..26423)
DNA (771bp) protein (257aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BPB2_BIFBR
Hypothetical membrane spanning protein in uncharacterized protein family UPF0126
Conserved hypothetical membrane spanning protein in uncharacterized protein family UPF0126 {ECO:0000313|EMBL:ABE95613.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_040_124G1_scaffold_211_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26721..27602)
DNA (882bp) protein (294aa)
MazG family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E542_BIFBR
MazG family protein {ECO:0000313|EMBL:ERI87526.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
MazG-like protein
L2_040_124G1_scaffold_211_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27801..28928)
DNA (1128bp) protein (376aa)
Branched-chain-amino-acid transaminase n=6 Tax=Bifidobacterium breve RepID=F6C9N8_BIFBA
Branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AHJ21099.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_211_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29152..29781)
DNA (630bp) protein (210aa)
50S ribosomal protein L25 n=6 Tax=Bifidobacterium breve RepID=F6C9N9_BIFBA
LSU ribosomal protein L25P
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_211_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30179..31462
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZFM0_BIFBR
Permease MFS superfamily
Uncharacterized protein {ECO:0000313|EMBL:EPD75151.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_040_124G1_scaffold_211_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31450..32829)
DNA (1380bp) protein (460aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
NAD(P) transhydrogenase subunit beta n=2 Tax=Bifidobacterium breve RepID=F6C9P0_BIFBA
NAD(P) transhydrogenase subunit beta
L2_040_124G1_scaffold_211_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32829..33134)
DNA (306bp) protein (102aa)
NAD(P) transhydrogenase alpha subunit n=4 Tax=Bifidobacterium breve RepID=F9XZM9_BIFBU
NAD(P) transhydrogenase alpha subunit
NAD(P) transhydrogenase alpha subunit {ECO:0000313|EMBL:AHJ21095.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_040_124G1_scaffold_211_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33150..34313)
DNA (1164bp) protein (388aa)
Putative NAD(P)(+) transhydrogenase, alpha subunit n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0G5_BIFBR
Putative NAD(P)(+) transhydrogenase, alpha subunit {ECO:0000313|EMBL:ERI87532.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
pntA1; alanine dehydrogenase/PNT domain protein
L2_040_124G1_scaffold_211_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34706..36739
DNA (2034bp) protein (678aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTX7_BIFBR
fadD2; Long-chain-fatty-acid--CoA ligase
AMP-binding enzyme {ECO:0000313|EMBL:ERI87533.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Displaying items 1-30 of 78 in total

View Taxonomy