ggKbase home page

L2_040_124G1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_219_1
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)
RNA polymerase sigma factor RpoD n=3 Tax=Enterobacter cloacae RepID=D6DMC9_ENTCL
rpoD; hypothetical protein
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1334630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae EC_38VIM1.;"
L2_040_124G1_scaffold_219_2
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235..1980)
DNA (1746bp) protein (582aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Enterobacter aerogenes EA1509E RepID=L8BMN7_ENTAE
L2_040_124G1_scaffold_219_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2117..2332)
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=4 Tax=Enterobacteriaceae RepID=R4YIT2_KLEPN
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_124G1_scaffold_219_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2571..3584
DNA (1014bp) protein (338aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Escherichia coli MP021017.6 RepID=M8M040_ECOLX
UGMP family protein
L2_040_124G1_scaffold_219_5
Salmonella bongori, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3619..4242)
DNA (624bp) protein (208aa)
Glycerol-3-phosphate acyltransferase n=2 Tax=Salmonella bongori RepID=F8VDQ2_SALBC
hypothetical protein
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1197719 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella bongori N268-08.;"
L2_040_124G1_scaffold_219_6
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4350..4718
DNA (369bp) protein (123aa)
folB; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase (EC:4.1.2.25)
Bifunctioal dihydroneopterin aldolase dihydroneopterin triphosphate 2'-epimerase n=3 Tax=Escherichia fergusonii RepID=B7LQD6_ESCF3
Dihydroneopterin aldolase {ECO:0000313|EMBL:GAL57730.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
L2_040_124G1_scaffold_219_7
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4825..5643
DNA (819bp) protein (273aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Enterobacter sp. (strain 638) RepID=UPPP_ENT38
L2_040_124G1_scaffold_219_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5831..7948
DNA (2118bp) protein (706aa)
Glycoside hydrolase family 18 n=1 Tax=Rahnella sp. (strain Y9602) RepID=E8XR11_RAHSY
polysaccharide degrading enzyme
Polysaccharide degrading enzyme {ECO:0000313|EMBL:AHY10422.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_040_124G1_scaffold_219_9
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7993..9240)
DNA (1248bp) protein (416aa)
Multifunctional CCA protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LYH5_ENTBF
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
tRNA nucleotidyltransferase/poly(A) polymerase
L2_040_124G1_scaffold_219_10
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9306..9926)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1MBJ2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL45735.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
hypothetical protein
L2_040_124G1_scaffold_219_11
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10166..11467
DNA (1302bp) protein (434aa)
Adenylate cyclase n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SBR6_ENTAL
adenylate cyclase
Adenylate cyclase {ECO:0000313|EMBL:AEN66439.1}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
L2_040_124G1_scaffold_219_12
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11491..14325
DNA (2835bp) protein (945aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC:2.7.7.42)
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase n=1 Tax=Enterobacter cloacae RepID=UPI0002EDF089
L2_040_124G1_scaffold_219_13
Leclercia adecarboxylata, Leclercia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14379..15809
DNA (1431bp) protein (477aa)
Bifunctional protein HldE n=1 Tax=Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56) RepID=D5CB27_ENTCC
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=911008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leclercia.;" source="Leclercia adecarboxylata ATCC 23216 = NBRC 102595.;"
heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
L2_040_124G1_scaffold_219_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15852..16169)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Enterobacter cloacae complex RepID=J7GMF2_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:AKE61598.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_219_15
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16555..17208
DNA (654bp) protein (218aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180, ECO:0000256|SAAS:SAAS00038056}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180, ECO:0000256|SAAS:SAAS00037921};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VQV6_9ENTR
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase
L2_040_124G1_scaffold_219_16
Leclercia adecarboxylata, Leclercia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17292..18068)
DNA (777bp) protein (259aa)
Zinc transporter ZupT n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M1S4_ENTBF
putative divalent heavy-metal cations transporter
Zinc transporter ZupT {ECO:0000256|HAMAP-Rule:MF_00548, ECO:0000256|SAAS:SAAS00012146}; TaxID=911008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leclercia.;" source="Leclercia adecarboxylata ATCC 23216 = NBRC 102595.;"
L2_040_124G1_scaffold_219_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18265..19053
DNA (789bp) protein (263aa)
LigB family dioxygenase n=1 Tax=Enterobacter cloacae RepID=UPI0002E0D2A1
dioxygenase
Dioxygenase {ECO:0000313|EMBL:AHY10412.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_040_124G1_scaffold_219_18
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19092..20252)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8APS3_CITK8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV15486.1}; TaxID=290338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696).;"
L2_040_124G1_scaffold_219_19
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20258..20926)
DNA (669bp) protein (223aa)
membrane protein n=1 Tax=Enterobacter cloacae RepID=UPI000311D125
UPF0441 protein YgiB {ECO:0000256|HAMAP-Rule:MF_01188}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
L2_040_124G1_scaffold_219_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21086..22561)
DNA (1476bp) protein (492aa)
Outer membrane protein TolC n=4 Tax=Citrobacter RepID=J1G4Q4_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC11139.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
outer membrane channel protein
L2_040_124G1_scaffold_219_21
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22766..23398
DNA (633bp) protein (211aa)
ADP-ribose pyrophosphatase n=1 Tax=Cronobacter universalis NCTC 9529 RepID=K8DSN9_9ENTR
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:GAL57744.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
nudF; ADP-ribose pyrophosphatase NudF
L2_040_124G1_scaffold_219_22
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23395..23817
DNA (423bp) protein (141aa)
Uncharacterized protein n=25 Tax=Enterobacter RepID=D5CB10_ENTCC
Uncharacterized protein {ECO:0000313|EMBL:GAL57745.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
dehydrogenase
L2_040_124G1_scaffold_219_23
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23842..24669
DNA (828bp) protein (276aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
3'''',5''''-cyclic-nucleotide phosphodiesterase n=1 Tax=Enterobacter cloacae RepID=UPI00031A5475
hypothetical protein
L2_040_124G1_scaffold_219_24
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24669..25244
DNA (576bp) protein (192aa)
Esterase yqiA n=1 Tax=Enterobacter cloacae UCICRE 3 RepID=V3GJD5_ENTCL
esterase
Esterase {ECO:0000313|EMBL:AJB72368.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L2_040_124G1_scaffold_219_25
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25286..27178
DNA (1893bp) protein (631aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
DNA topoisomerase 4 subunit B n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRM7_CITRI
parE; topoisomerase IV subunit B
L2_040_124G1_scaffold_219_26
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27199..28074)
DNA (876bp) protein (292aa)
Cupin domain protein n=1 Tax=Enterobacter cloacae S611 RepID=V5A9P9_ENTCL
Cupin domain protein {ECO:0000313|EMBL:ESS57400.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
AraC family transcriptional regulator
L2_040_124G1_scaffold_219_27
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28241..30067
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M1X4_ENTBF
Uncharacterized protein {ECO:0000313|EMBL:GAL57752.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
L2_040_124G1_scaffold_219_28
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30132..31400
DNA (1269bp) protein (423aa)
Oligosaccharide/H+ symporter, major facilitator superfamily (MFS) n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SBN6_ENTAL
Lactose permease {ECO:0000313|EMBL:GAL57753.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
major facilitator superfamily oligosaccharide/H+ symporter
L2_040_124G1_scaffold_219_29
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31455..32645
DNA (1191bp) protein (397aa)
Glycosyl Hydrolase Family 88 n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LYK2_ENTBF
Glycosyl Hydrolase Family 88
Glycosyl Hydrolase Family 88 {ECO:0000313|EMBL:AGB76713.1}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
L2_040_124G1_scaffold_219_30
Enterobacter sp. 35027, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32724..33038)
DNA (315bp) protein (105aa)
Quinol monooxygenase YgiN n=11 Tax=Enterobacter cloacae complex RepID=F5S1V8_9ENTR
quinol monooxygenase
Quinol monooxygenase {ECO:0000313|EMBL:KJN99222.1}; TaxID=1619239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35027.;"
Displaying items 1-30 of 50 in total

View Taxonomy