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L2_040_124G1_scaffold_234

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_234_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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82..636
DNA (555bp) protein (185aa)
DNA-invertase lambdoid prophage e14 n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2Q3B9_ECOLX
DNA-invertase lambdoid prophage e14 {ECO:0000313|EMBL:ESJ99507.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
DNA-invertase
L2_040_124G1_scaffold_234_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(644..1279)
DNA (636bp) protein (212aa)
Putative formate transporter 1 n=1 Tax=Escherichia coli STEC_MHI813 RepID=G2C7B4_ECOLX
focB; putative formate transporter 2
Formate transporter {ECO:0000313|EMBL:EZD89806.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_040_124G1_scaffold_234_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1301..3313)
DNA (2013bp) protein (671aa)
DNA-binding transcriptional activator, formate sensing n=2 Tax=Escherichia coli RepID=L2UW03_ECOLX
DNA-binding transcriptional activator, formate sensing {ECO:0000313|EMBL:ELC07456.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hyfR; hydrogenase-4 transcriptional activator
L2_040_124G1_scaffold_234_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3343..3756)
DNA (414bp) protein (138aa)
Processing element hydrogenase 4 n=2 Tax=Escherichia coli RepID=L2UZ79_ECOLX
Processing element hydrogenase 4 {ECO:0000313|EMBL:ESK12416.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
formate hydrogenlyase maturation protein HycH
L2_040_124G1_scaffold_234_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3749..4507)
DNA (759bp) protein (253aa)
Hydrogenase-4, I subunit n=41 Tax=Enterobacteriaceae RepID=A8A2Y0_ECOHS
NADH ubiquinone oxidoreductase 20 kDa subunit
Formate hydrogenlyase {ECO:0000313|EMBL:EYV14288.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L2_040_124G1_scaffold_234_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4504..5049)
DNA (546bp) protein (182aa)
Hydrogenase 4 subunit H n=24 Tax=Escherichia coli RepID=D7YBM3_ECOLX
4Fe-4S binding domain protein {ECO:0000313|EMBL:KDX26004.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
hyfH; hydrogenase 4, Fe-S subunit HyfH
L2_040_124G1_scaffold_234_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5059..6726)
DNA (1668bp) protein (556aa)
Hydrogenase-4 component G n=2 Tax=Escherichia coli RepID=L2UZ08_ECOLX
Hydrogenase-4 component G {ECO:0000313|EMBL:ELC07452.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hydrogenase 4 subunit
L2_040_124G1_scaffold_234_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6716..8296)
DNA (1581bp) protein (527aa)
Hydrogenase-4 component F n=65 Tax=Escherichia RepID=L2UVZ9_ECOLX
Hydrogenase-4 component F {ECO:0000313|EMBL:ELC07451.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hyfF; hydrogenase 4 subunit F
L2_040_124G1_scaffold_234_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8301..8951)
DNA (651bp) protein (217aa)
hyfE; Hydrogenase-4 component E (EC:1.-.-.-)
Hydrogenase 4, membrane subunit n=54 Tax=Escherichia RepID=B2N3D0_ECOLX
Hydrogenase 4, membrane subunit {ECO:0000313|EMBL:EDU64841.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
L2_040_124G1_scaffold_234_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8963..10186)
DNA (1224bp) protein (408aa)
Hydrogenase-4 component D n=46 Tax=Escherichia RepID=E3PFX4_ECOH1
hydrogenase-4 component D
NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:EMX31291.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L2_040_124G1_scaffold_234_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10203..11150)
DNA (948bp) protein (316aa)
Hydrogenase-4 component C n=34 Tax=Escherichia RepID=B2N3D2_ECOLX
hydrogenase-4 subunit C
Hydrogenase-4 component C {ECO:0000313|EMBL:EQY18308.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_040_124G1_scaffold_234_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11161..12510)
DNA (1350bp) protein (450aa)
Hydrogenase-4 component B {ECO:0000313|EMBL:EMX01883.1}; EC=1.-.-.- {ECO:0000313|EMBL:EMX01883.1};; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
hyfB; Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 (EC:1.-.-.-)
NADH-Ubiquinone/plastoquinone n=28 Tax=Escherichia RepID=E9WHN9_ECOLX
L2_040_124G1_scaffold_234_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12507..13178)
DNA (672bp) protein (224aa)
Hydrogenase-4, subunit B HyfB n=199 Tax=Enterobacteriaceae RepID=F4M6S6_ECOLX
hypothetical protein
Hydrogenase 4 subunit B {ECO:0000313|EMBL:EFJ88060.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_040_124G1_scaffold_234_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13178..13795)
DNA (618bp) protein (206aa)
Hydrogenase-4 component A n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2RGZ2_ECOLX
Hydrogenase-4 component A {ECO:0000313|EMBL:ESK12426.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hydrogenase-4, subunit A HyfA
L2_040_124G1_scaffold_234_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14048..14518)
DNA (471bp) protein (157aa)
Putative peroxiredoxin bcp n=1410 Tax=Enterobacteriaceae RepID=BCP_ECO57
hypothetical protein
Thioredoxin-dependent thiol peroxidase {ECO:0000313|EMBL:ESD28904.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_040_124G1_scaffold_234_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14518..15090)
DNA (573bp) protein (191aa)
Glycine cleavage system transcriptional repressor n=1140 Tax=Enterobacteriaceae RepID=GCVR_ECOLI
gcvR; glycine cleavage system transcriptional repressor
Glycine cleavage system transcriptional repressor {ECO:0000313|EMBL:ELD98367.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L2_040_124G1_scaffold_234_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15236..16114
DNA (879bp) protein (293aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1113 Tax=Enterobacteriaceae RepID=DAPA_ECO24
L2_040_124G1_scaffold_234_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16131..17165
DNA (1035bp) protein (345aa)
Outer membrane protein assembly factor BamC n=643 Tax=Enterobacteriaceae RepID=BAMC_ECOLI
NlpBDapX family lipoprotein
Outer membrane protein assembly factor BamC {ECO:0000256|HAMAP-Rule:MF_00924}; Flags: Precursor;; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L2_040_124G1_scaffold_234_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17076..17306)
DNA (231bp) protein (77aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=179 Tax=Enterobacteriaceae RepID=J7R3R8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY18300.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_040_124G1_scaffold_234_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17378..18091
DNA (714bp) protein (238aa)
purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1338 Tax=Enterobacteriaceae RepID=PUR7_ECO24
L2_040_124G1_scaffold_234_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18259..19122
DNA (864bp) protein (288aa)
Uncharacterized protein YpfJ n=1033 Tax=Enterobacteriaceae RepID=YPFJ_ECO57
hypothetical protein
Neutral zinc metallopeptidase family protein {ECO:0000313|EMBL:END51878.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
L2_040_124G1_scaffold_234_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19137..21152
DNA (2016bp) protein (672aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
tRNA(Met) cytidine acetyltransferase TmcA n=8 Tax=Escherichia coli RepID=K5C5S1_ECOLX
ypfI; hydrolase
L2_040_124G1_scaffold_234_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21226..21924
DNA (699bp) protein (233aa)
Phospholipase/Carboxylesterase n=4 Tax=Escherichia coli RepID=E9XK74_ECOLX
ypfH; esterase
Esterase YpfH {ECO:0000313|EMBL:EOV05452.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
L2_040_124G1_scaffold_234_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22034..22234)
DNA (201bp) protein (67aa)
Membrane protein n=2 Tax=Escherichia coli RepID=V8J174_ECOLX
hypothetical protein
UPF0370 protein YpfN {ECO:0000256|HAMAP-Rule:MF_01566}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L2_040_124G1_scaffold_234_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22262..23389)
DNA (1128bp) protein (376aa)
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
Succinyl-diaminopimelate desuccinylase n=583 Tax=Enterobacteriaceae RepID=DAPE_ECO24
L2_040_124G1_scaffold_234_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23393..23749)
DNA (357bp) protein (119aa)
Uncharacterized protein n=471 Tax=Enterobacteriaceae RepID=C3T0G5_ECOLX
yffB; putative reductase
Reductase {ECO:0000313|EMBL:AIF64355.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L2_040_124G1_scaffold_234_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24288..27401)
DNA (3114bp) protein (1038aa)
Probable aminoglycoside efflux pump n=173 Tax=Enterobacteriaceae RepID=ACRD_ECOLI
Multidrug transporter {ECO:0000313|EMBL:EZE32249.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
acrD; aminoglycoside efflux pump
L2_040_124G1_scaffold_234_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27565..29265)
DNA (1701bp) protein (567aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
Nitrate/nitrite sensor protein NarQ n=122 Tax=Escherichia RepID=NARQ_ECOLI
narQ; narQ
L2_040_124G1_scaffold_234_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29471..31450
DNA (1980bp) protein (660aa)
Protein AegA n=132 Tax=Bacteria RepID=AEGA_ECOLI
Putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit {ECO:0000313|EMBL:AJF57323.1}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1303.;"
glutamate synthase, small subunit
L2_040_124G1_scaffold_234_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31518..32093
DNA (576bp) protein (192aa)
GDP-mannose pyrophosphatase NudK {ECO:0000313|EMBL:EFK12554.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFK12554.1};; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
GDP-mannose pyrophosphatase NudK n=161 Tax=Enterobacteriaceae RepID=NUDK_ECODH
yffH; putative NUDIX hydrolase
Displaying items 1-30 of 72 in total

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