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L2_040_124G1_scaffold_283

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_283_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..295
DNA (294bp) protein (98aa)
citrate lyase, alpha subunit (EC:4.1.3.6)
Citrate lyase alpha subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4M8_9CLOT
Citrate lyase alpha subunit {ECO:0000313|EMBL:CCY43976.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_283_2
Sporosarcina newyorkensis, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(468..1169)
DNA (702bp) protein (234aa)
Nitrilotriacetate monooxygenase component B n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DSC8_9BACL
Nitrilotriacetate monooxygenase component B {ECO:0000313|EMBL:EGQ26265.1}; TaxID=1027292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" source="Sporosarcina newyorkensis 2681.;"
hypothetical protein
L2_040_124G1_scaffold_283_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1303..3531)
DNA (2229bp) protein (743aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VXX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59015.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain.
L2_040_124G1_scaffold_283_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3612..4343
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43628.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_040_124G1_scaffold_283_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4556..5920
DNA (1365bp) protein (455aa)
Citrate transporter n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITG1_9CLOT
Citrate transporter {ECO:0000313|EMBL:CCY43629.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
H+/citrate symporter
L2_040_124G1_scaffold_283_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6380..7720
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43630.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative efflux protein, MATE family
L2_040_124G1_scaffold_283_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7771..8766
DNA (996bp) protein (332aa)
citC; [citrate [pro-3S]-lyase] ligase CitC (EC:6.2.1.22)
[citrate (Pro-3S)-lyase] ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3M4_9CLOT
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:CCY43631.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_283_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8855..9496
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN99_9CLOT
L2_040_124G1_scaffold_283_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9738..10766
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43635.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dctP; putative TRAP C4-dicarboxylate transport system DctP subunit
L2_040_124G1_scaffold_283_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10766..11269
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43637.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dctQ; putative TRAP C4-dicarboxylate transport system DctQ subunit
L2_040_124G1_scaffold_283_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11266..12573
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43638.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dctM; putative TRAP C4-dicarboxylate transport system permease
L2_040_124G1_scaffold_283_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12838..13824
DNA (987bp) protein (329aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43640.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_283_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13838..15139
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43644.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Protein of unknown function (DUF1576).
L2_040_124G1_scaffold_283_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15244..15828
DNA (585bp) protein (195aa)
HD domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INI9_9CLOT
HD domain protein {ECO:0000313|EMBL:CCY43645.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
HD domain-containing protein
L2_040_124G1_scaffold_283_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15825..16313
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J405_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43647.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
floX; putative flavodoxin
L2_040_124G1_scaffold_283_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16469..16825)
DNA (357bp) protein (119aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9UY31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08792.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_040_124G1_scaffold_283_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17043..17561
DNA (519bp) protein (173aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITI1_9CLOT
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:CCY43649.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
heptaprenyl diphosphate synthase component I
L2_040_124G1_scaffold_283_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17684..19210
DNA (1527bp) protein (509aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J409_9CLOT
L2_040_124G1_scaffold_283_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19296..20717)
DNA (1422bp) protein (474aa)
GerA spore germination protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITK0_9CLOT
GerA spore germination protein {ECO:0000313|EMBL:CCY43664.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
GerA spore germination protein
L2_040_124G1_scaffold_283_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21209..22117
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95664.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_040_124G1_scaffold_283_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22358..24328
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J437_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43677.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NAD+ synthetase
L2_040_124G1_scaffold_283_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24330..25115
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43679.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
rRNA methylases
L2_040_124G1_scaffold_283_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25165..25455
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J441_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43682.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_283_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25446..26606
DNA (1161bp) protein (387aa)
Patatin n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3S7_9CLOT
Patatin {ECO:0000313|EMBL:CCY43686.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
patatin
L2_040_124G1_scaffold_283_25
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26625..27680
DNA (1056bp) protein (352aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JJS7_9CLOT
L2_040_124G1_scaffold_283_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27719..28021
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43689.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_283_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28110..29090
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INM5_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_283_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29041..30333
DNA (1293bp) protein (431aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43691.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_283_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30375..31271
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J450_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43692.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
diacylglycerol kinase catalytic subunit
L2_040_124G1_scaffold_283_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31451..32593
DNA (1143bp) protein (381aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:7 RepID=R5INF4_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RpoD subfamily RNA polymerase sigma-70 subunit
Displaying items 1-30 of 48 in total

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