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L2_040_124G1_scaffold_304

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_304_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26..1525
DNA (1500bp) protein (500aa)
Dipeptidase n=6 Tax=Enterobacteriaceae RepID=K8QYF0_CITFR
Peptidase C69 family protein {ECO:0000313|EMBL:KEL79801.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
peptidase
L2_040_124G1_scaffold_304_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1562..2464)
DNA (903bp) protein (301aa)
Family transcriptional regulator n=3 Tax=Citrobacter RepID=J0LUA6_9ENTR
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC11836.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LysR family transcriptional regulator
L2_040_124G1_scaffold_304_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2569..3576
DNA (1008bp) protein (336aa)
Bifunctional protein: zinc-containing alcohol dehydrogenase quinone oxidoreductase ( NADPH:quinone reductase) Similar to arginate lyase {ECO:0000313|EMBL:CDL40631.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDL40631.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UID9_9ENTR
NADPH:quinone reductase
L2_040_124G1_scaffold_304_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3578..3883
DNA (306bp) protein (102aa)
Antibiotic biosynthesis monooxygenase n=6 Tax=Citrobacter RepID=J0M0H9_9ENTR
Antibiotic biosynthesis monooxygenase family protein {ECO:0000313|EMBL:KEL79798.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
antibiotic biosynthesis monooxygenase
L2_040_124G1_scaffold_304_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4002..4904
DNA (903bp) protein (301aa)
Transporter YicL n=4 Tax=Citrobacter RepID=J0VLV1_9ENTR
Carboxylate/amino acid/amine transporter {ECO:0000313|EMBL:ETX67597.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_124G1_scaffold_304_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4933..5751)
DNA (819bp) protein (273aa)
Lipoprotein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDY3_9ENTR
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
L2_040_124G1_scaffold_304_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5875..6789)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CK64_CITFR
Transposase {ECO:0000313|EMBL:ETX67599.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_304_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7000..7743)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DS78_CITFR
4-hydroxy-2-ketovalerate aldolase {ECO:0000313|EMBL:KJC11842.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
4-hydroxy-2-ketovalerate aldolase
L2_040_124G1_scaffold_304_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7730..8839)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UK21_9ENTR
L-seryl-tRNA(Sec) selenium transferase-related protein {ECO:0000313|EMBL:CDL40640.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
selenocysteine synthase
L2_040_124G1_scaffold_304_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8843..9700)
DNA (858bp) protein (286aa)
PTS system, mannose-specific IID component {ECO:0000313|EMBL:CDL40641.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL40641.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
PTS system mannose/fructose/sorbose IID component family protein n=8 Tax=Enterobacteriaceae RepID=I6HFX1_SHIFL
PTS fructose transporter subunit IID
L2_040_124G1_scaffold_304_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9700..10449)
DNA (750bp) protein (250aa)
PTS system sorbose-specific iic component family protein n=8 Tax=Enterobacteriaceae RepID=I6HFX0_SHIFL
PTS sorbose transporter subunit IIC
PTS sorbose transporter subunit IIC {ECO:0000313|EMBL:AHY11146.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_040_124G1_scaffold_304_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10475..10960)
DNA (486bp) protein (162aa)
Pts system protein n=6 Tax=Citrobacter RepID=J0LU95_9ENTR
PTS sugar transporter {ECO:0000313|EMBL:KJC11846.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
PTS sugar transporter
L2_040_124G1_scaffold_304_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10973..11398)
DNA (426bp) protein (142aa)
PTS system fructose IIA component family protein n=4 Tax=Enterobacteriaceae RepID=I6HFW8_SHIFL
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EIQ79660.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
PTS fructose transporter subunit IIA
L2_040_124G1_scaffold_304_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11519..14317)
DNA (2799bp) protein (933aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QUQ7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX67606.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_040_124G1_scaffold_304_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14408..14824)
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=J0VLU4_9ENTR
Blasticidin S-acetyltransferase {ECO:0000313|EMBL:KJC11849.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
blasticidin S-acetyltransferase
L2_040_124G1_scaffold_304_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14955..15248
DNA (294bp) protein (98aa)
Secreted protein n=2 Tax=Citrobacter RepID=J1FYD0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67608.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_304_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15343..16725
DNA (1383bp) protein (461aa)
Glycosyl hydrolase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QLE0_CITFR
Glycosyl hydrolase 1 family protein {ECO:0000313|EMBL:KEL79784.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
6-phospho-beta-glucosidase
L2_040_124G1_scaffold_304_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16775..17965)
DNA (1191bp) protein (397aa)
Purine ribonucleoside efflux pump NepI n=2 Tax=Citrobacter RepID=K8QNN5_CITFR
Purine ribonucleoside efflux pump NepI {ECO:0000256|HAMAP-Rule:MF_01189}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
nepI; ribonucleoside transporter
L2_040_124G1_scaffold_304_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18180..18539
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J0M0G7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL79782.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Protein of unknown function (DUF1044)
L2_040_124G1_scaffold_304_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18523..18846
DNA (324bp) protein (108aa)
Dna-binding protein n=3 Tax=Citrobacter RepID=J0VLT9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67612.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Xre family transcriptional regulator
L2_040_124G1_scaffold_304_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18913..19365)
DNA (453bp) protein (151aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J1FYC6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67613.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_304_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19491..20882)
DNA (1392bp) protein (464aa)
Sugar phosphate antiporter n=8 Tax=Citrobacter RepID=J0LU85_9ENTR
Hexose phosphate transport protein {ECO:0000313|EMBL:KEL79779.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
uhpT; sugar phosphate antiporter
L2_040_124G1_scaffold_304_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21025..22353)
DNA (1329bp) protein (443aa)
Regulatory protein uhpC n=5 Tax=Citrobacter RepID=J1FY60_9ENTR
Regulatory protein UhpC {ECO:0000313|EMBL:KJC11857.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
regulatory protein UhpC
L2_040_124G1_scaffold_304_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22363..23865)
DNA (1503bp) protein (501aa)
histidine kinase (EC:2.7.13.3)
Sensory histidine kinase UhpB n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DT88_CITFR
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:KEL79777.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_040_124G1_scaffold_304_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23862..24455)
DNA (594bp) protein (198aa)
Transcriptional regulatory protein uhpA n=8 Tax=Citrobacter RepID=C1ME00_9ENTR
Transcriptional regulatory protein uhpA {ECO:0000313|EMBL:ETX61652.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
uhpA; Transcriptional regulatory protein UhpA
L2_040_124G1_scaffold_304_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24609..25622)
DNA (1014bp) protein (338aa)
Cytoplasmic protein n=2 Tax=Citrobacter RepID=J1FYC2_9ENTR
Deoxyribose mutarotase {ECO:0000313|EMBL:KJC04794.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
deoxyribose mutarotase
L2_040_124G1_scaffold_304_27
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25634..26950)
DNA (1317bp) protein (439aa)
Permease n=6 Tax=Citrobacter RepID=J0LU82_9ENTR
Sugar:proton symporter {ECO:0000313|EMBL:KKC61705.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
sugar:proton symporter
L2_040_124G1_scaffold_304_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26978..27898)
DNA (921bp) protein (307aa)
Ribokinase {ECO:0000313|EMBL:KEL79773.1}; EC=2.7.1.15 {ECO:0000313|EMBL:KEL79773.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Ribokinase n=2 Tax=Citrobacter RepID=R8UIG5_9ENTR
ribokinase
L2_040_124G1_scaffold_304_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28222..29007
DNA (786bp) protein (262aa)
DeoR family transcriptional regulator n=4 Tax=Citrobacter RepID=J0M0F8_9ENTR
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KJC04797.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DeoR faimly transcriptional regulator
L2_040_124G1_scaffold_304_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29009..29299)
DNA (291bp) protein (97aa)
acetolactate synthase 1 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase isozyme 1 small subunit n=12 Tax=Enterobacteriaceae RepID=C1ME05_9ENTR
Acetolactate synthase isozyme 1 small subunit {ECO:0000313|EMBL:ETX61657.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Displaying items 1-30 of 42 in total

View Taxonomy