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L2_040_124G1_scaffold_308

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_308_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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119..1798
DNA (1680bp) protein (560aa)
fdhF; formate dehydrogenase H alph subunit (formate-hydrogen-lyase-linked selenocysteine-containing polypeptide) (EC:1.2.1.2)
Formate dehydrogenase H alph subunit (Formate-hydrogen-lyase-linked selenocysteine-containing polypeptide) n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPZ5_CITRI
Formate dehydrogenase {ECO:0000313|EMBL:AKE61182.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L2_040_124G1_scaffold_308_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1923..2591
DNA (669bp) protein (223aa)
Putative exported protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPZ3_CITRI
Uncharacterized protein {ECO:0000313|EMBL:AKE61181.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_308_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2689..3999)
DNA (1311bp) protein (437aa)
Proton glutamate symport protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPZ2_CITRI
Glutamate:protein symporter {ECO:0000313|EMBL:KEY51662.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
gltP; proton glutamate symport protein
L2_040_124G1_scaffold_308_4
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4333..4953)
DNA (621bp) protein (207aa)
Formate-dependent nitrite reductase complex subunit n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPZ1_CITRI
Formate-dependent nitrite reductase subunit NrfG {ECO:0000313|EMBL:GAL49625.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
nrfG; formate-dependent nitrite reductase complex subunit
L2_040_124G1_scaffold_308_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4950..5453)
DNA (504bp) protein (168aa)
Cytochrome c nitrite reductase, accessory protein NrfF n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BKQ0_9ENTR
Nitrite reductase {ECO:0000313|EMBL:AKE61178.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
nitrite reductase
L2_040_124G1_scaffold_308_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5446..7059)
DNA (1614bp) protein (538aa)
Heme lyase subunit NrfE n=2 Tax=Salmonella enterica subsp. enterica serovar Braenderup RepID=V2CZI3_SALET
Heme lyase {ECO:0000313|EMBL:AKE61177.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
heme lyase
L2_040_124G1_scaffold_308_7
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7200..8156)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AN23_CITK8
Nitrite reductase {ECO:0000313|EMBL:AKE61176.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_308_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8153..8824)
DNA (672bp) protein (224aa)
Cytochrome c nitrite reductase, Fe-S protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BKQ3_9ENTR
Nitrite reductase {ECO:0000313|EMBL:AKE61175.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
nitrite reductase
L2_040_124G1_scaffold_308_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8821..9384)
DNA (564bp) protein (188aa)
Cytochrome c-type protein NrfB n=2 Tax=Citrobacter RepID=C1MFK0_9ENTR
Cytochrome C nitrite reductase {ECO:0000313|EMBL:AKE61174.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cytochrome C nitrite reductase
L2_040_124G1_scaffold_308_10
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9487..10923)
DNA (1437bp) protein (479aa)
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; Ammonia-forming cytochrome c nitrite reductase {ECO:0000256|HAMAP-Rule:MF_01182}; Flags: Precursor;; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Cytochrome c-552 n=4 Tax=Citrobacter RepID=J1FWV5_9ENTR
nrfA; cytochrome c552
L2_040_124G1_scaffold_308_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11356..13314
DNA (1959bp) protein (653aa)
Acetyl-CoA synthetase {ECO:0000313|EMBL:AKE61172.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AKE61172.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Acetyl-coenzyme A synthetase n=2 Tax=Citrobacter RepID=R8VNU0_9ENTR
acetyl-CoA synthetase
L2_040_124G1_scaffold_308_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13556..13870
DNA (315bp) protein (105aa)
Inner membrane protein yjcH n=2 Tax=Citrobacter RepID=R8VNQ0_9ENTR
Membrane protein {ECO:0000313|EMBL:AKE61171.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_308_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13867..15516
DNA (1650bp) protein (550aa)
Cation/acetate symporter ActP n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPY2_CITRI
Acetate permease {ECO:0000313|EMBL:AKE61170.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
actP; cation/acetate symporter
L2_040_124G1_scaffold_308_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15559..16248)
DNA (690bp) protein (230aa)
LrgB-like family protein n=6 Tax=Salmonella newport RepID=I9JSA6_SALNE
LrgB {ECO:0000313|EMBL:AKE61169.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_308_15
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16241..16651)
DNA (411bp) protein (137aa)
Holin-like protein CidA n=1 Tax=Salmonella bongori N268-08 RepID=S5N334_SALBN
Uncharacterized protein {ECO:0000313|EMBL:GAL49614.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
LrgA
L2_040_124G1_scaffold_308_16
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16755..17630
DNA (876bp) protein (292aa)
LysR family regulatory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607 RepID=V1IU13_SALET
Uncharacterized protein {ECO:0000313|EMBL:KDF10426.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
LysR family regulatory protein
L2_040_124G1_scaffold_308_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18068..19714)
DNA (1647bp) protein (549aa)
Na+/H+ antiporter n=323 Tax=Salmonella choleraesuis RepID=B5F2E5_SALA4
Putative Na(+)/H(+) exchanger YjcE {ECO:0000313|EMBL:GAL49612.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
yjcE; sodium/hydrogen exchanger family protein
L2_040_124G1_scaffold_308_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19863..21212)
DNA (1350bp) protein (450aa)
Putative permease n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPX7_CITRI
Permase {ECO:0000313|EMBL:AKE61164.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
permease
L2_040_124G1_scaffold_308_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21559..22227)
DNA (669bp) protein (223aa)
Putative glutathione S transferase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPX6_CITRI
Putative glutathione S-transferase {ECO:0000313|EMBL:GAL49610.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
glutathione S transferase
L2_040_124G1_scaffold_308_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22482..22946)
DNA (465bp) protein (155aa)
Redox-sensitive transcriptional activator SoxR n=1 Tax=Escherichia coli H489 RepID=E9Y457_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:KEY51681.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
soxR; DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing
L2_040_124G1_scaffold_308_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23032..23355
DNA (324bp) protein (108aa)
AraC-family transcriptional regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPX4_CITRI
Transcriptional regulator {ECO:0000313|EMBL:KEY51682.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
soxS; AraC family transcriptional regulator
L2_040_124G1_scaffold_308_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23358..24944)
DNA (1587bp) protein (529aa)
Putative signal transduction protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPX3_CITRI
Signal peptide protein {ECO:0000313|EMBL:AKE61160.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
signal transduction protein
L2_040_124G1_scaffold_308_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25538..25819
DNA (282bp) protein (94aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPX1_CITRI
Membrane protein {ECO:0000313|EMBL:AKE61159.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_308_24
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26065..26175)
DNA (111bp) protein (37aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPW4_CITRI
Uncharacterized protein {ECO:0000313|EMBL:KDF10414.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L2_040_124G1_scaffold_308_25
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26366..29083
DNA (2718bp) protein (906aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AN52_CITK8
Potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:KDF10413.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L2_040_124G1_scaffold_308_26
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29151..29582)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AN54_CITK8
Uncharacterized protein {ECO:0000313|EMBL:GAL49604.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L2_040_124G1_scaffold_308_27
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29831..30358)
DNA (528bp) protein (176aa)
Single-stranded DNA-binding protein n=2 Tax=Citrobacter RepID=R8VTA3_9ENTR
Single-stranded DNA-binding protein {ECO:0000313|EMBL:AKE61111.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
single-stranded DNA-binding protein
L2_040_124G1_scaffold_308_28
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30611..33433
DNA (2823bp) protein (941aa)
UvrABC system protein A n=2 Tax=Salmonella enterica I RepID=V1LNF6_SALET
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
excinuclease ABC subunit A
L2_040_124G1_scaffold_308_29
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33475..33825)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRT0_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL49601.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L2_040_124G1_scaffold_308_30
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33953..34666)
DNA (714bp) protein (238aa)
Class B acid phosphatase {ECO:0000256|PIRNR:PIRNR017818}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR017818};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
aphA; acid phosphatase (EC:3.1.3.2)
Class B acid phosphatase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AN58_CITK8
Displaying items 1-30 of 34 in total

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