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L2_040_124G1_scaffold_321

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_321_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..243)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QU26_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX67345.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
DNA utilization protein HofN
L2_040_124G1_scaffold_321_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(243..1022)
DNA (780bp) protein (260aa)
Putative pilus assembly protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0C0_CITFR
Pilus assembly protein {ECO:0000313|EMBL:ETX67346.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
DNA utilization protein HofM
L2_040_124G1_scaffold_321_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1143..3695
DNA (2553bp) protein (851aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:KEL80078.1}; EC=3.4.-.- {ECO:0000313|EMBL:KEL80078.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Penicillin-binding protein 1a n=3 Tax=Citrobacter RepID=K8QVN6_CITFR
mrcA; penicillin-binding protein 1A
L2_040_124G1_scaffold_321_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3751..4311)
DNA (561bp) protein (187aa)
ADP compounds hydrolase nudE {ECO:0000313|EMBL:KEL80077.1}; EC=3.6.1.- {ECO:0000313|EMBL:KEL80077.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Adenosine nucleotide hydrolase NudE n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R489_CITFR
nudE; adenosine nucleotide hydrolase
L2_040_124G1_scaffold_321_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4634..6769
DNA (2136bp) protein (712aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R1FQ13_CITFR
Intracellular growth attenuator protein igaA {ECO:0000313|EMBL:KEL80075.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Intracellular growth attenuator protein igaA
L2_040_124G1_scaffold_321_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6832..7500
DNA (669bp) protein (223aa)
HAD hydrolase, family IA n=8 Tax=Citrobacter RepID=C1MD74_9ENTR
Hydrolase {ECO:0000313|EMBL:ETX67350.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
nucleotidase
L2_040_124G1_scaffold_321_7
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7511..7912
DNA (402bp) protein (134aa)
Heat shock protein 15 n=3 Tax=Citrobacter RepID=K8R0B6_CITFR
ribosome-associated heat shock protein Hsp15
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_124G1_scaffold_321_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7937..8815
DNA (879bp) protein (293aa)
33 kDa chaperonin n=7 Tax=Citrobacter RepID=G9SBB3_CITFR
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hslO; Hsp33-like chaperonin
L2_040_124G1_scaffold_321_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8920..10638)
DNA (1719bp) protein (573aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=J0VRY0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL80071.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
L2_040_124G1_scaffold_321_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11017..12639
DNA (1623bp) protein (541aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=9 Tax=Citrobacter RepID=C1MD78_9ENTR
L2_040_124G1_scaffold_321_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12714..14066)
DNA (1353bp) protein (451aa)
Osmolarity sensor protein n=3 Tax=Citrobacter RepID=K8QVM6_CITFR
Osmolarity sensor protein {ECO:0000313|EMBL:KJC05404.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
envZ; osmolarity sensor protein
L2_040_124G1_scaffold_321_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14063..14782)
DNA (720bp) protein (240aa)
Osmolarity response regulator n=7 Tax=Enterobacteriaceae RepID=E8NSQ2_SALET
ompR; two-component response regulator OmpR
Transcriptional regulatory protein ompR {ECO:0000313|EMBL:ESM36801.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae BWH 31.;"
L2_040_124G1_scaffold_321_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15008..15481
DNA (474bp) protein (158aa)
Transcription elongation factor GreB n=9 Tax=Citrobacter RepID=C1MD81_9ENTR
greB; transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_040_124G1_scaffold_321_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15580..17913
DNA (2334bp) protein (778aa)
Protein YhgF n=4 Tax=Citrobacter RepID=J0VRY5_9ENTR
Protein yhgF {ECO:0000313|EMBL:KEL80066.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcription accessory protein
L2_040_124G1_scaffold_321_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18289..18516
DNA (228bp) protein (76aa)
Ferrous iron transporter A n=12 Tax=Enterobacteriaceae RepID=C1MD83_9ENTR
feoA; ferrous iron transporter A
Ferrous iron transport protein A {ECO:0000313|EMBL:CDL41379.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_040_124G1_scaffold_321_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18535..20853
DNA (2319bp) protein (773aa)
Ferrous iron transporter B n=5 Tax=Citrobacter RepID=J1G341_9ENTR
Ferrous iron transport protein B {ECO:0000313|EMBL:KEL80064.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
feoB; ferrous iron transporter B
L2_040_124G1_scaffold_321_17
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20865..21101
DNA (237bp) protein (79aa)
Ferrous iron transport protein C n=11 Tax=Enterobacteriaceae RepID=C1MD85_9ENTR
Ferrous iron transport protein C {ECO:0000256|HAMAP-Rule:MF_01586, ECO:0000256|SAAS:SAAS00010729}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
ferrous iron transporter C
L2_040_124G1_scaffold_321_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21347..22285
DNA (939bp) protein (313aa)
Isncy family n=3 Tax=Citrobacter RepID=J1G3C0_9ENTR
Transposase {ECO:0000313|EMBL:ETX67362.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_321_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22331..23101)
DNA (771bp) protein (257aa)
Pimeloyl-[acyl-carrier protein] methyl ester esterase {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064125}; EC=3.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064111};; Biotin synthesis protein BioH {ECO:0000256|HAMAP-Rule:MF_01260}; Carboxylesterase BioH {ECO:0000256|HAMAP-Rule:MF_01260}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
carboxylesterase (EC:3.1.1.1)
Pimelyl-[acyl-carrier protein] methyl ester esterase n=3 Tax=Citrobacter RepID=J0VRZ0_9ENTR
L2_040_124G1_scaffold_321_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23139..23822
DNA (684bp) protein (228aa)
Gluconate periplasmic binding protein n=4 Tax=Citrobacter RepID=J0M5Q3_9ENTR
DNA utilization protein GntX {ECO:0000313|EMBL:KJC08966.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
DNA utilization protein GntX
L2_040_124G1_scaffold_321_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23881..24456
DNA (576bp) protein (192aa)
Fe/S biogenesis protein NfuA n=10 Tax=Citrobacter RepID=C1MD89_9ENTR
Fe/S biogenesis protein NfuA
Fe/S biogenesis protein NfuA {ECO:0000256|HAMAP-Rule:MF_01637, ECO:0000256|SAAS:SAAS00035357}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_040_124G1_scaffold_321_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24825..26141
DNA (1317bp) protein (439aa)
High-affinity gluconate transporter n=12 Tax=Enterobacteriaceae RepID=C1MD90_9ENTR
High-affinity gluconate transporter {ECO:0000313|EMBL:ETX67366.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
gluconate transporter
L2_040_124G1_scaffold_321_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26187..28274)
DNA (2088bp) protein (696aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS73_CITFR
L2_040_124G1_scaffold_321_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28284..30677)
DNA (2394bp) protein (798aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Phosphorylase n=3 Tax=Citrobacter RepID=J0VRZ5_9ENTR
maltose phosphorylase
L2_040_124G1_scaffold_321_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31296..34001
DNA (2706bp) protein (902aa)
HTH-type transcriptional regulator MalT n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0A4_CITFR
HTH-type transcriptional regulator MalT {ECO:0000256|HAMAP-Rule:MF_01247, ECO:0000256|SAAS:SAAS00010382}; ATP-dependent transcriptional activator MalT {ECO:0000256|HAMAP-Rule:MF_01247}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator MalT
L2_040_124G1_scaffold_321_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34043..34801)
DNA (759bp) protein (253aa)
Glycerol-3-phosphate regulon repressor n=10 Tax=Enterobacteriaceae RepID=C1MD94_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHY10850.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_040_124G1_scaffold_321_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34897..35727)
DNA (831bp) protein (277aa)
Rhomboid protease GlpG {ECO:0000256|HAMAP-Rule:MF_01594}; EC=3.4.21.105 {ECO:0000256|HAMAP-Rule:MF_01594};; Intramembrane serine protease {ECO:0000256|HAMAP-Rule:MF_01594}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Rhomboid protease GlpG n=6 Tax=Citrobacter RepID=J0LZ95_9ENTR
intramembrane serine protease GlpG
L2_040_124G1_scaffold_321_28
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35803..36129)
DNA (327bp) protein (109aa)
Thiosulfate sulfurtransferase GlpE {ECO:0000256|HAMAP-Rule:MF_01009, ECO:0000256|SAAS:SAAS00010956}; EC=2.8.1.1 {ECO:0000256|HAMAP-Rule:MF_01009, ECO:0000256|SAAS:SAAS00010962};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
glpE; thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase GlpE n=6 Tax=Citrobacter RepID=J1G3D1_9ENTR
L2_040_124G1_scaffold_321_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36328..37836
DNA (1509bp) protein (503aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase n=5 Tax=Citrobacter RepID=J0VS00_9ENTR
L2_040_124G1_scaffold_321_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37927..38571)
DNA (645bp) protein (215aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Phosphorylase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI53_9ENTR
maltodextrin phosphorylase
Displaying 30 items

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