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L2_040_124G1_scaffold_332

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_332_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..490
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P36 RepID=T4Q457_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG78052.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
conserved hypothetical protein
L2_040_124G1_scaffold_332_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

695..1183
DNA (489bp) protein (163aa)
Uncharacterized protein n=60 Tax=Clostridium difficile RepID=T3IDU4_CLODC
conserved hypothetical protein
Domain of uncharacterised function (DUF3841) {ECO:0000313|EMBL:CKH64552.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ97179.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_040_124G1_scaffold_332_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1269..1676
DNA (408bp) protein (136aa)
Uncharacterized protein n=181 Tax=Clostridium difficile RepID=G6BYW5_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQE69339.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_040_124G1_scaffold_332_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1728..1895
DNA (168bp) protein (56aa)
DNA-binding helix-turn-helix protein n=179 Tax=Clostridium difficile RepID=G6BYW6_CLODI
transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:EQG77892.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_332_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2754..3059
DNA (306bp) protein (102aa)
Putative membrane protein n=1 Tax=Clostridium difficile CD69 RepID=T3AF51_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG77492.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_040_124G1_scaffold_332_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3467..4156
DNA (690bp) protein (230aa)
Response regulator n=3 Tax=Clostridium difficile RepID=T2UYR5_CLODI
Two-component response regulator {ECO:0000313|EMBL:CCL24892.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
two-component response regulator
L2_040_124G1_scaffold_332_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4156..5073
DNA (918bp) protein (306aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
His Kinase A domain protein n=31 Tax=Clostridium difficile RepID=T2W0G9_CLODI
Two-component sensor histidine kinase
L2_040_124G1_scaffold_332_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5143..6072
DNA (930bp) protein (310aa)
ABC transporter family protein n=23 Tax=Clostridium difficile RepID=T2V5B9_CLODI
ABC-type transportsystem,lantibiotic/multidrug-family ATP-binding protein
ABC-type transport system,lantibiotic/multidrug-family ATP-binding protein {ECO:0000313|EMBL:CAJ67477.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_040_124G1_scaffold_332_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6069..6749
DNA (681bp) protein (227aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=G6BYX3_CLODI
ABC-2 transporter family protein {ECO:0000313|EMBL:EQG77319.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
lantibiotic ABC transporter permease
L2_040_124G1_scaffold_332_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7009..7182
DNA (174bp) protein (58aa)
Fic/DOC family protein n=2 Tax=Clostridium difficile RepID=T4B3A0_CLODI
fic family protein
Fic family protein {ECO:0000313|EMBL:EHJ31789.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_040_124G1_scaffold_332_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8006..8656
DNA (651bp) protein (217aa)
Bacterial regulatory s, gntR family protein n=155 Tax=Clostridium difficile RepID=T3I9U4_CLODC
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL32684.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_040_124G1_scaffold_332_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8925..10991
DNA (2067bp) protein (689aa)
Peptidase, S9A/B/C family, catalytic domain protein n=4 Tax=Clostridium difficile RepID=G6BYX6_CLODI
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EQG77992.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
peptidase
L2_040_124G1_scaffold_332_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11008..12963
DNA (1956bp) protein (652aa)
Prolyl oligopeptidase family protein n=4 Tax=Clostridium difficile RepID=T3T4Z0_CLODI
putative peptidase, S9 family
Putative peptidase, S9 family {ECO:0000313|EMBL:CAJ67482.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_040_124G1_scaffold_332_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12979..14169
DNA (1191bp) protein (397aa)
Uncharacterized protein n=157 Tax=Clostridium difficile RepID=G6BYX8_CLODI
hypothetical protein
Putative permease {ECO:0000313|EMBL:CCL24900.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_040_124G1_scaffold_332_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14877..15608)
DNA (732bp) protein (244aa)
Helix-turn-helix domain, rpiR family protein n=11 Tax=Clostridium difficile RepID=T3LCD7_CLODI
SIS domain protein {ECO:0000313|EMBL:EHJ31795.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
phosphosugar-binding protein
L2_040_124G1_scaffold_332_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15761..17731
DNA (1971bp) protein (657aa)
PTS system, fructose subfamily, IIA component domain protein n=4 Tax=Clostridium difficile RepID=T3T5T9_CLODI
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EHJ33610.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
PTS system, fructose-specific component family
L2_040_124G1_scaffold_332_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17850..20516
DNA (2667bp) protein (889aa)
Glycosyl hydrolases family 38 N-terminal domain protein n=4 Tax=Clostridium difficile RepID=T4GE26_CLODI
Glycosyl hydrolase family 38 protein {ECO:0000313|EMBL:EHJ31797.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
glycosyl hydrolase, family 38
L2_040_124G1_scaffold_332_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20509..22203
DNA (1695bp) protein (565aa)
sucrose phosphorylase (EC:2.4.1.7)
Alpha amylase, catalytic domain protein n=4 Tax=Clostridium difficile RepID=T3T5A1_CLODI
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EHJ31798.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_040_124G1_scaffold_332_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22445..23155
DNA (711bp) protein (237aa)
Response regulator n=4 Tax=Clostridium difficile RepID=T3T433_CLODI
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EHJ31799.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
LytR family DNA-binding response regulator
L2_040_124G1_scaffold_332_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23149..24465
DNA (1317bp) protein (439aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=4 Tax=Clostridium difficile RepID=T3T6B0_CLODI
Putative sensor histidine kinase VirS {ECO:0000313|EMBL:EHJ31800.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
sensor histidine kinase virs
L2_040_124G1_scaffold_332_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24478..24645
DNA (168bp) protein (56aa)
Uncharacterized protein n=11 Tax=Clostridium difficile RepID=G6B685_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ33615.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
autoinducer prepeptide
L2_040_124G1_scaffold_332_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24685..25278
DNA (594bp) protein (198aa)
Accessory transciptional regulator B family protein n=4 Tax=Clostridium difficile RepID=T3T453_CLODI
Accessory protein regulator protein B {ECO:0000313|EMBL:EHJ33616.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
accessory gene regulator
L2_040_124G1_scaffold_332_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25970..26134
DNA (165bp) protein (55aa)
Uncharacterized protein n=11 Tax=Clostridium difficile RepID=G6B687_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ31803.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_040_124G1_scaffold_332_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26513..29086
DNA (2574bp) protein (858aa)
FtsX-like permease family protein n=4 Tax=Clostridium difficile RepID=T3T4V9_CLODI
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EHJ31804.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
ABC transporter permease
L2_040_124G1_scaffold_332_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29112..30398
DNA (1287bp) protein (429aa)
Radical SAM domain protein n=1 Tax=Clostridium difficile E13 RepID=U3VUQ6_CLODI
Radical SAM domain protein {ECO:0000313|EMBL:EHJ31805.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
radical SAM protein
L2_040_124G1_scaffold_332_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30399..31445
DNA (1047bp) protein (349aa)
Radical SAM additional 4Fe4S-binding SPASM domain protein n=4 Tax=Clostridium difficile RepID=T3T369_CLODI
Radical SAM domain protein {ECO:0000313|EMBL:EHJ31806.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
radical SAM domain-containing protein
L2_040_124G1_scaffold_332_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31509..32747
DNA (1239bp) protein (413aa)
Radical SAM additional 4Fe4S-binding SPASM domain protein n=4 Tax=Clostridium difficile RepID=T3T6H8_CLODI
Radical SAM domain protein {ECO:0000313|EMBL:EHJ33621.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
radical SAM protein
L2_040_124G1_scaffold_332_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32828..33871
DNA (1044bp) protein (348aa)
Subtilase family protein n=4 Tax=Clostridium difficile RepID=T3T4H9_CLODI
CGGC domain protein {ECO:0000313|EMBL:EHJ31808.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
serine protease
L2_040_124G1_scaffold_332_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33969..34688
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=7 Tax=Clostridium difficile RepID=G6B693_CLODI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHJ33623.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_040_124G1_scaffold_332_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34826..36670
DNA (1845bp) protein (615aa)
ABC transporter family protein n=4 Tax=Clostridium difficile RepID=T4GG45_CLODI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHJ31810.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
ABC transporter ATP-binding protein
Displaying items 1-30 of 31 in total

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