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L2_040_124G1_scaffold_361

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_361_1
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..163
DNA (162bp) protein (54aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. CAG:149 RepID=R5LVF3_9CLOT
Site-specific recombinase XerD
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFE12496.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_040_124G1_scaffold_361_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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327..779
DNA (453bp) protein (151aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42217.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_361_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(893..2266)
DNA (1374bp) protein (458aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZN4_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CCY42216.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative efflux protein, MATE family
L2_040_124G1_scaffold_361_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2238..2714)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42215.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcriptional regulators
L2_040_124G1_scaffold_361_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2933..3910
DNA (978bp) protein (326aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEQ60194.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEQ60194.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA polymerase III, delta subunit n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQA0_9FIRM
DNA polymerase III subunit delta
L2_040_124G1_scaffold_361_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4033..4638
DNA (606bp) protein (202aa)
UPF0340 protein HMPREF9467_04637 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIN4_9CLOT
UPF0340 protein BN757_00185 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
conserved hypothetical protein TIGR01440
L2_040_124G1_scaffold_361_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4747..5010)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZ61_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
30S ribosomal protein S20
L2_040_124G1_scaffold_361_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5390..6355
DNA (966bp) protein (322aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
spore protease (EC:3.4.24.78)
Germination protease n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIM3_9CLOT
L2_040_124G1_scaffold_361_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6606..7382
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZ58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41996.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
permease, DMT superfamily
L2_040_124G1_scaffold_361_10
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7442..8689
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KNR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63767.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Stage II sporulation P family protein
L2_040_124G1_scaffold_361_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9011..10681
DNA (1671bp) protein (557aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Elongation factor 4 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN42_9CLOT
GTP-binding protein LepA
L2_040_124G1_scaffold_361_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10850..12058
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41727.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
oxygen-independent coproporphyrinogen III oxidase
L2_040_124G1_scaffold_361_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12155..12460)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41725.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
branched-chain amino acid transporter
L2_040_124G1_scaffold_361_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12461..13168)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41724.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AzlC family protein
L2_040_124G1_scaffold_361_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13187..14197)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41722.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
type I L-asparaginase
L2_040_124G1_scaffold_361_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14512..15456
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41721.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Membrane protease subunits, stomatin/prohibitin homologs
L2_040_124G1_scaffold_361_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15552..16949
DNA (1398bp) protein (466aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II14_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CCY41720.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative efflux protein, MATE family
L2_040_124G1_scaffold_361_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16980..17840
DNA (861bp) protein (287aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41718.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_361_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17870..18526
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41717.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
HAD-superfamily hydrolase
L2_040_124G1_scaffold_361_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18654..19160
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41715.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
acetolactate synthase small subunit
L2_040_124G1_scaffold_361_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19295..20314
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ketol-acid reductoisomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHT6_9CLOT
ketol-acid reductoisomerase
L2_040_124G1_scaffold_361_22
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20423..20662)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RYA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69005.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L2_040_124G1_scaffold_361_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20663..21544)
DNA (882bp) protein (294aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY97_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY41712.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LysR family transcriptional regulator
L2_040_124G1_scaffold_361_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21674..22555)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41710.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LysR family transcriptional regulator
L2_040_124G1_scaffold_361_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22723..24000
DNA (1278bp) protein (426aa)
UPF0597 protein BN757_00167 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHT1_9CLOT
UPF0597 protein BN757_00167 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_361_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24112..24387)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41707.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_361_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24577..25788
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41705.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
iron-only hydrogenase maturation protein HydF
L2_040_124G1_scaffold_361_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26137..26604
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHS7_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_361_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26806..27942
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY98_9CLOT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transcription termination factor NusA
L2_040_124G1_scaffold_361_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27976..28248
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41699.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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