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L2_040_124G1_scaffold_377

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_377_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..80
DNA (78bp) protein (26aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2861200 RepID=M8V1R6_ECOLX
IS1 ORF2
Insertion element IS1 protein insB {ECO:0000313|EMBL:EOU68321.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L2_040_124G1_scaffold_377_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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362..928
DNA (567bp) protein (189aa)
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase n=1132 Tax=Enterobacteriaceae RepID=MEPS_ECO57
lipoprotein NlpC
Lipoprotein spr {ECO:0000313|EMBL:EGI11821.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L2_040_124G1_scaffold_377_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1109..2665
DNA (1557bp) protein (519aa)
Protein Rtn n=199 Tax=Enterobacteriaceae RepID=RTN_ECOLI
EAL domain protein {ECO:0000313|EMBL:KDZ19476.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
hypothetical protein
L2_040_124G1_scaffold_377_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2747..4561
DNA (1815bp) protein (605aa)
ABC transporter, peripllasmic solute-binding proteins n=34 Tax=Escherichia coli RepID=A8A240_ECOHS
Microcin C transport system substrate-binding protein {ECO:0000313|EMBL:EOV78322.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
ABC transporter peripllasmic solute-binding proteins
L2_040_124G1_scaffold_377_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4562..5656
DNA (1095bp) protein (365aa)
Inner membrane ABC transporter permease protein YejB n=834 Tax=Enterobacteriaceae RepID=YEJB_ECO57
yejB; microcin C transporter YejABEF, permease subunit, ABC family
Inner membrane ABC transporter permease protein yejB {ECO:0000313|EMBL:KEN89792.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_040_124G1_scaffold_377_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5656..6681
DNA (1026bp) protein (342aa)
ABC transporter, permease protein n=705 Tax=Enterobacteriaceae RepID=A8A242_ECOHS
inner membrane ABC transporter permease YejE
ABC transporter, permease protein {ECO:0000313|EMBL:ESA91838.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L2_040_124G1_scaffold_377_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6683..8272
DNA (1590bp) protein (530aa)
Oligopeptide ABC transporter ATP-binding protein n=2 Tax=Escherichia coli RepID=L2V0F3_ECOLX
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESK05347.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
ABC transporter ATP-binding protein
L2_040_124G1_scaffold_377_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8276..8620)
DNA (345bp) protein (115aa)
Uncharacterized protein YejG n=1090 Tax=Enterobacteriaceae RepID=YEJG_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP64061.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L2_040_124G1_scaffold_377_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8879..9964)
DNA (1086bp) protein (362aa)
Bicyclomycin/multidrug efflux system n=4 Tax=Escherichia coli RepID=I0VSG6_ECOLX
Bicyclomycin/multidrug efflux system {ECO:0000313|EMBL:EID67082.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
bicyclomycin/multidrug efflux system protein
L2_040_124G1_scaffold_377_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9992..10687)
DNA (696bp) protein (232aa)
rsuA; 16s rRNA pseudouridylate synthase A (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Ribosomal small subunit pseudouridine synthase A n=1325 Tax=Enterobacteriaceae RepID=RSUA_ECO57
L2_040_124G1_scaffold_377_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10837..12597
DNA (1761bp) protein (587aa)
Predicted ATP-dependent helicase n=237 Tax=Enterobacteriaceae RepID=C8TUA9_ECO26
Putative nucleic acid ATP-dependent helicase {ECO:0000313|EMBL:CAR13707.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
yejH; putative ATP-dependent helicase
L2_040_124G1_scaffold_377_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12722..13006
DNA (285bp) protein (95aa)
50S ribosomal protein L25 n=1 Tax=Shigella flexneri serotype 5b (strain 8401) RepID=Q0T2T6_SHIF8
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L2_040_124G1_scaffold_377_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13145..14152)
DNA (1008bp) protein (336aa)
Nucleoid-associated protein YejK n=1077 Tax=Enterobacteriaceae RepID=NDPA_ECO24
37kDa nucleoid-associated protein
Nucleoid-associated protein YejK {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
L2_040_124G1_scaffold_377_14
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14334..14561
DNA (228bp) protein (76aa)
UPF0352 protein YejL n=1208 Tax=Enterobacteriaceae RepID=YEJL_ECO55
hypothetical protein
UPF0352 protein YejL {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L2_040_124G1_scaffold_377_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14581..16341
DNA (1761bp) protein (587aa)
Inner membrane protein YejM n=841 Tax=Escherichia RepID=YEJM_ECO57
Inner membrane protein yejM {ECO:0000313|EMBL:KDY68400.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
yejM; putative hydrolase, inner membrane
L2_040_124G1_scaffold_377_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16595..19186)
DNA (2592bp) protein (864aa)
Outer membrane autotransporter barrel domain-containing protein n=2 Tax=Escherichia coli RepID=L2UXL8_ECOLX
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:ELC08026.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
outer membrane autotransporter
L2_040_124G1_scaffold_377_17
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19506..20153
DNA (648bp) protein (216aa)
Nitrate/nitrite response regulator (Sensor NarQ) n=732 Tax=Enterobacteriaceae RepID=J7QTA7_ECOLX
transcriptional regulator NarP
Nitrate/nitrite response regulator protein {ECO:0000313|EMBL:EFW52214.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L2_040_124G1_scaffold_377_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20188..21240)
DNA (1053bp) protein (351aa)
Cytochrome c-type biogenesis family protein n=51 Tax=Escherichia coli RepID=A8A256_ECOHS
ccmH; heme lyase, CcmH subunit
Cytochrome c-type biogenesis protein CcmH {ECO:0000313|EMBL:ENG96736.1}; TaxID=1116067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.3.;"
L2_040_124G1_scaffold_377_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21237..21794)
DNA (558bp) protein (186aa)
Thiol:disulfide interchange protein DsbE n=1308 Tax=Enterobacteriaceae RepID=DSBE_ECO57
dsbE; thiol:disulfide interchange protein DsbE
Disulfide interchange protein DsbE {ECO:0000313|EMBL:KDZ19493.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L2_040_124G1_scaffold_377_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21791..23734)
DNA (1944bp) protein (648aa)
Cytochrome c-type biogenesis protein CcmF n=294 Tax=Enterobacteriaceae RepID=CCMF_ECOLI
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:KDZ41711.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
heme lyase, CcmF subunit
L2_040_124G1_scaffold_377_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23731..24210)
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1370 Tax=Enterobacteriaceae RepID=CCME_ECO24
ccmE; periplasmic heme chaperone
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L2_040_124G1_scaffold_377_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24207..24416)
DNA (210bp) protein (70aa)
Heme exporter protein D n=1376 Tax=Enterobacteriaceae RepID=CCMD_ECO57
ccmD; heme exporter protein CcmD
Heme exporter protein CcmD {ECO:0000313|EMBL:EHU42437.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L2_040_124G1_scaffold_377_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24413..25150)
DNA (738bp) protein (246aa)
Heme exporter protein C n=2 Tax=Escherichia coli RepID=L2UYD9_ECOLX
Heme exporter protein C {ECO:0000313|EMBL:ELC08033.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ccmC; heme exporter protein CcmC
L2_040_124G1_scaffold_377_24
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25192..25854)
DNA (663bp) protein (221aa)
Heme exporter protein B n=1164 Tax=Enterobacteriaceae RepID=CCMB_ECO57
heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L2_040_124G1_scaffold_377_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25851..26468)
DNA (618bp) protein (206aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
Cytochrome C biogenesis protein CcmA n=1 Tax=Escherichia coli LAU-EC7 RepID=V8LCL2_ECOLX
heme exporter protein CcmA
L2_040_124G1_scaffold_377_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26487..27089)
DNA (603bp) protein (201aa)
Cytochrome c-type protein NapC n=1279 Tax=Enterobacteriaceae RepID=NAPC_ECO57
napC; cytochrome c-type protein napC
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_040_124G1_scaffold_377_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27099..27548)
DNA (450bp) protein (150aa)
Periplasmic nitrate reductase, electron transfer subunit n=585 Tax=Enterobacteriaceae RepID=J7QTB6_ECOLX
napB; citrate reductase cytochrome C subunit
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L2_040_124G1_scaffold_377_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27545..28408)
DNA (864bp) protein (288aa)
Ferredoxin-type protein NapH n=490 Tax=cellular organisms RepID=NAPH_ECOLI
napH; quinol dehydrogenase membrane component
Ferredoxin-type , NapH/MauN family protein {ECO:0000313|EMBL:EMX31029.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L2_040_124G1_scaffold_377_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28395..29090)
DNA (696bp) protein (232aa)
Ferredoxin-type protein NapG n=1096 Tax=Enterobacteriaceae RepID=NAPG_ECOL6
methylamine utilization ferredoxin-type protein MauM
Ferredoxin {ECO:0000313|EMBL:EQQ07859.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_040_124G1_scaffold_377_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29097..31583)
DNA (2487bp) protein (829aa)
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
Periplasmic nitrate reductase n=448 Tax=Enterobacteriaceae RepID=NAPA_ECOHS
napA; nitrate reductase catalytic subunit
Displaying items 1-30 of 55 in total

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