ggKbase home page

L2_040_124G1_scaffold_382

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_382_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130..366)
DNA (237bp) protein (79aa)
Uncharacterized protein n=123 Tax=Enterobacteriaceae RepID=D7ZZK3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESP06215.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L2_040_124G1_scaffold_382_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

507..1295
DNA (789bp) protein (263aa)
Ferric iron reductase fhuF n=2 Tax=Escherichia coli RepID=L2VE39_ECOLX
Ferric iron reductase fhuF {ECO:0000313|EMBL:ELC13119.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ferric hydroximate transport ferric iron reductase
L2_040_124G1_scaffold_382_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1333..2010)
DNA (678bp) protein (226aa)
Transcriptional regulator, LuxR family n=487 Tax=Enterobacteriaceae RepID=A7ZVQ7_ECO24
DNA-binding transcriptional activator BglJ
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KEN84180.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_040_124G1_scaffold_382_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1968..2693)
DNA (726bp) protein (242aa)
Transcriptional regulator n=2 Tax=Escherichia coli RepID=L2VEZ2_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:ELC13117.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
yjjQ; putative DNA-binding transcriptional regulator
L2_040_124G1_scaffold_382_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3312..4082
DNA (771bp) protein (257aa)
Inner membrane protein yjjP n=2 Tax=Escherichia coli RepID=E9YLE3_ECOLX
hypothetical protein
Inner membrane protein yjjP {ECO:0000313|EMBL:EGB70972.1}; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TW10509.;"
L2_040_124G1_scaffold_382_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4073..4546
DNA (474bp) protein (158aa)
UPF0442 protein YjjB n=474 Tax=Enterobacteriaceae RepID=YJJB_ECOK1
hypothetical protein
UPF0442 protein YjjB {ECO:0000256|HAMAP-Rule:MF_01191}; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
L2_040_124G1_scaffold_382_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4653..5192
DNA (540bp) protein (180aa)
Primosomal protein 1 n=570 Tax=Enterobacteriaceae RepID=DNAT_ECO24
primosomal protein 1
Primosomal protein 1 {ECO:0000256|HAMAP-Rule:MF_01061}; Primosomal protein I {ECO:0000256|HAMAP-Rule:MF_01061}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
L2_040_124G1_scaffold_382_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5195..5932
DNA (738bp) protein (246aa)
DNA replication protein DnaC n=1347 Tax=cellular organisms RepID=DNAC_ECO57
DNA replication protein DnaC
DNA replication protein dnaC {ECO:0000313|EMBL:EOV72866.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_124G1_scaffold_382_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5981..6475
DNA (495bp) protein (165aa)
Uncharacterized protein YjjA n=578 Tax=Enterobacteriaceae RepID=YJJA_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOU98997.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L2_040_124G1_scaffold_382_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6729..9020
DNA (2292bp) protein (764aa)
Phosphoglycerol transferase I {ECO:0000256|HAMAP-Rule:MF_01070}; EC=2.7.8.20 {ECO:0000256|HAMAP-Rule:MF_01070};; Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase {ECO:0000256|HAMAP-Rule:MF_01070}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
Phosphoglycerol transferase I n=31 Tax=Escherichia coli RepID=C8TQB4_ECO26
mdoB; phosphoglycerol transferase I
L2_040_124G1_scaffold_382_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9160..10182)
DNA (1023bp) protein (341aa)
Oxidoreductase, zinc-binding dehydrogenase family n=3 Tax=Escherichia coli RepID=B2N0E5_ECOLX
Oxidoreductase, zinc-binding dehydrogenase family {ECO:0000313|EMBL:EDU65783.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
yjjN; oxidoreductase, Zn-dependent and NAD(P)-binding
L2_040_124G1_scaffold_382_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10321..11235
DNA (915bp) protein (305aa)
Transcriptional regulator n=3 Tax=Escherichia coli RepID=L2VE30_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:ESK00015.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
yjjM; Regulator of L-galactonate catabolism YjjM
L2_040_124G1_scaffold_382_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11452..12813
DNA (1362bp) protein (454aa)
Transporter, major facilitator family n=412 Tax=Escherichia RepID=A7ZVP5_ECO24
transporter
L-galactonate MFS transporter {ECO:0000313|EMBL:EHU45258.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_040_124G1_scaffold_382_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12862..14526)
DNA (1665bp) protein (555aa)
Methyl-accepting chemotaxis sensory transducer n=73 Tax=Escherichia coli RepID=B1IS63_ECOLC
Chemotaxis protein {ECO:0000313|EMBL:KIG50543.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
methyl-accepting chemotaxis sensory transducer
L2_040_124G1_scaffold_382_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14645..15091)
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=68 Tax=Escherichia coli RepID=B1IS64_ECOLC
MarR family transcriptional regulator
Homoprotocatechuate degradative operon repressor {ECO:0000313|EMBL:EOV72859.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_124G1_scaffold_382_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15363..16652
DNA (1290bp) protein (430aa)
Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase {ECO:0000313|EMBL:KDY59997.1}; EC=4.1.1.68 {ECO:0000313|EMBL:KDY59997.1};; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 (EC:4.1.1.68)
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase n=93 Tax=Escherichia coli RepID=B2N0F1_ECOLX
L2_040_124G1_scaffold_382_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16649..18115
DNA (1467bp) protein (489aa)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:KDY62655.1}; EC=1.2.1.60 {ECO:0000313|EMBL:KDY62655.1};; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase n=50 Tax=Escherichia coli RepID=B1IS66_ECOLC
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
L2_040_124G1_scaffold_382_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18117..18968
DNA (852bp) protein (284aa)
3,4-dihydroxyphenylacetate 2,3-dioxygenase n=338 Tax=Enterobacteriaceae RepID=Q46980_ECOLX
hpaD; Homoprotocatechuate dyoxygenase
3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:EZA37326.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L2_040_124G1_scaffold_382_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18978..19358
DNA (381bp) protein (127aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate isomerase n=148 Tax=Escherichia coli RepID=B1IS68_ECOLC
5-carboxymethyl-2-hydroxymuconate Delta-isomerase {ECO:0000313|EMBL:AEJ59847.1}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNF18.;"
L2_040_124G1_scaffold_382_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19426..20229
DNA (804bp) protein (268aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Escherichia coli 3.2303 RepID=I2YGR3_ECOLX
ybl224; ybl224
2-oxo-hepta-3-ene-1,7-dioate hydratase {ECO:0000313|EMBL:EZA37328.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L2_040_124G1_scaffold_382_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20240..20884
DNA (645bp) protein (215aa)
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase {ECO:0000256|HAMAP-Rule:MF_01292}; EC=4.1.2.52 {ECO:0000256|HAMAP-Rule:MF_01292};; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01292}; 4-hydroxy-2-ketoheptane-1,7-dioate aldolase {ECO:0000256|HAMAP-Rule:MF_01292}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase n=1 Tax=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) RepID=HPCH_SHIB3
hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
L2_040_124G1_scaffold_382_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21059..22435
DNA (1377bp) protein (459aa)
4-hydroxyphenylacetate permease n=2 Tax=Escherichia coli RepID=H4XDK6_ECOLX
4-hydroxyphenylacetate permease {ECO:0000313|EMBL:ESK00025.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
4-hydroxyphenylacetate transporter
L2_040_124G1_scaffold_382_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22445..23335
DNA (891bp) protein (297aa)
4-hydroxyphenylacetate catabolism regulatory protein HpaA n=2 Tax=Escherichia coli RepID=H1E0P1_ECOLX
4-hydroxyphenylacetate catabolism regulatory protein HpaA {ECO:0000313|EMBL:ESK00026.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hpaA; Regulator of the 4HPA-hydroxylase operon
L2_040_124G1_scaffold_382_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23586..25148
DNA (1563bp) protein (521aa)
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component {ECO:0000313|EMBL:EHW26574.1}; EC=1.14.14.9 {ECO:0000313|EMBL:EHW26574.1};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit n=247 Tax=Enterobacteriaceae RepID=J7QK23_ECOLX
hpaB; 4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit
L2_040_124G1_scaffold_382_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25166..25678
DNA (513bp) protein (171aa)
4-hydroxyphenylacetate 3-monooxygenase, reductase component {ECO:0000313|EMBL:EII21371.1}; EC=1.14.14.9 {ECO:0000313|EMBL:EII21371.1};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
4-hydroxyphenylacetate 3-monooxygenase reductase component n=307 Tax=Enterobacteriaceae RepID=HPAC_ECOLX
4-hydroxyphenylacetate 3-monooxygenase, reductase component
L2_040_124G1_scaffold_382_26
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26071..28221
DNA (2151bp) protein (717aa)
Carbon starvation family protein n=311 Tax=Enterobacteriaceae RepID=A8A871_ECOHS
Carbon starvation family protein {ECO:0000313|EMBL:EFW58278.1}; TaxID=945360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri CDC 796-83.;"
yjiY; inner membrane protein
L2_040_124G1_scaffold_382_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28271..28474
DNA (204bp) protein (68aa)
Uncharacterized protein YjiX n=1403 Tax=Enterobacteriaceae RepID=YJIX_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ86351.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_040_124G1_scaffold_382_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28485..29441
DNA (957bp) protein (319aa)
GTPase n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2QHH1_ECOLX
GTPase {ECO:0000313|EMBL:ESK00031.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
GTP-binding protein YjiA
L2_040_124G1_scaffold_382_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29519..32059)
DNA (2541bp) protein (847aa)
Penicillin G acylase n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2QGC3_ECOLX
Penicillin G acylase {ECO:0000313|EMBL:ESK00032.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
pac; penicillin G acylase
L2_040_124G1_scaffold_382_30
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32411..32575)
DNA (165bp) protein (55aa)
Uncharacterized protein n=110 Tax=Enterobacteriaceae RepID=B2N0H1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ28450.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 4444-74.;"
Displaying items 1-30 of 51 in total

View Taxonomy