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L2_040_124G1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_393_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(151..1074)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WK47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03496.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
transcriptional regulator
L2_040_124G1_scaffold_393_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1224..1976
DNA (753bp) protein (251aa)
alpha/beta hydrolase (EC:3.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG51845.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_040_124G1_scaffold_393_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2045..3349
DNA (1305bp) protein (435aa)
Citrate transporter n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZZ9_9CLOT
Citrate transporter {ECO:0000313|EMBL:EEG55361.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
CitMHS family citrate/H+ symporter
L2_040_124G1_scaffold_393_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3608..3745
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TFY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64560.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L2_040_124G1_scaffold_393_5
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3739..3852
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DF36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD88017.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L2_040_124G1_scaffold_393_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4060..5310
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43248.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
bifunctional PLP-dependent enzyme
L2_040_124G1_scaffold_393_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5316..6095
DNA (780bp) protein (260aa)
hydrolase, TatD family (EC:3.1.21.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2H4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43246.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6217..7080
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISG6_9CLOT
dimethyladenosine transferase
L2_040_124G1_scaffold_393_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7110..8348
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43243.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
myosin-crossreactive antigen
L2_040_124G1_scaffold_393_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8423..8821
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43241.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_393_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9193..10500
DNA (1308bp) protein (436aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Phosphomethylpyrimidine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM67_9CLOT
hydroxymethylpyrimidine synthase
L2_040_124G1_scaffold_393_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10606..11259
DNA (654bp) protein (218aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Thiamine-phosphate synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2F7_9CLOT
thiamine-phosphate pyrophosphorylase
L2_040_124G1_scaffold_393_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11626..16068
DNA (4443bp) protein (1481aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43224.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_393_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16069..17133
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43223.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
apbE; thiamin biosynthesis lipoprotein ApbE
L2_040_124G1_scaffold_393_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17146..17613)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43220.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
protein of unknown function DUF336
L2_040_124G1_scaffold_393_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17970..18527
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43219.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18668..19492
DNA (825bp) protein (275aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM59_9CLOT
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CCY43218.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
budC; putative acetoin(diacetyl) reductase
L2_040_124G1_scaffold_393_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19655..20479)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41623.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20637..21638)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41622.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21972..24563
DNA (2592bp) protein (864aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHK4_9CLOT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATPases with chaperone activity, ATP-binding subunit
L2_040_124G1_scaffold_393_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24925..25104
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41630.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_393_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25189..26379
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41631.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Type II secretion system F domain
L2_040_124G1_scaffold_393_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26415..27800
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41637.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27790..28317
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41638.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28301..28624
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41640.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28621..29073
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY57_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41641.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29078..29629
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41642.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29603..30088)
DNA (486bp) protein (162aa)
Leader peptidase (Prepilin peptidase) / N-methyltransferase (EC:3.4.23.43 2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41643.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_393_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30150..31799
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41644.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
type II secretion system protein E
L2_040_124G1_scaffold_393_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31989..32345
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41645.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
fimbrial protein
Displaying items 1-30 of 37 in total

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