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L2_040_124G1_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_401_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(225..1256)
DNA (1032bp) protein (344aa)
Ribosomal RNA small subunit methyltransferase C n=7 Tax=Escherichia coli RepID=M9GES8_ECOLX
16S rRNA methyltransferase {ECO:0000313|EMBL:AKE59982.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
rsmC; 16S ribosomal RNA m2G1207 methyltransferase
L2_040_124G1_scaffold_401_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1359..1772
DNA (414bp) protein (138aa)
DNA polymerase III subunit psi n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRW7_CITRI
DNA polymerase III subunit psi {ECO:0000313|EMBL:AKE59981.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
holD; DNA polymerase III subunit psi
L2_040_124G1_scaffold_401_3
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1741..2187
DNA (447bp) protein (149aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRW8_CITRI
Ribosomal-protein-alanine acetyltransferase RimI {ECO:0000313|EMBL:GAL49977.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L2_040_124G1_scaffold_401_4
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2199..2879
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Salmonella bongori RepID=F8VIC0_SALBC
Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:GAL49978.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L2_040_124G1_scaffold_401_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2972..4561
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=4 Tax=Klebsiella RepID=G8WK55_KLEOK
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
prfC; peptide chain release factor 3
L2_040_124G1_scaffold_401_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4969..5586
DNA (618bp) protein (206aa)
Osmotically-inducible protein Y n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRY4_CITRI
Periplasmic protein {ECO:0000313|EMBL:AKE59978.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
osmY; osmotically-inducible protein Y
L2_040_124G1_scaffold_401_7
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5711..5872
DNA (162bp) protein (54aa)
UPF0391 membrane protein WEU_00389 n=2 Tax=Citrobacter RepID=R8VJX2_9ENTR
hypothetical protein
UPF0391 membrane protein ytjA {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_124G1_scaffold_401_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5994..7067
DNA (1074bp) protein (358aa)
Patatin-like phospholipase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRY6_CITRI
Uncharacterized protein {ECO:0000313|EMBL:AKE59977.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
patatin-like phospholipase
L2_040_124G1_scaffold_401_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7064..7840
DNA (777bp) protein (259aa)
deoxyribonuclease (EC:3.1.21.-)
Putative deoxyribonuclease n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRY7_CITRI
Deoxyribonuclease YjjV {ECO:0000313|EMBL:AKE59976.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L2_040_124G1_scaffold_401_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7711..7971)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX65671.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_040_124G1_scaffold_401_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7968..8831)
DNA (864bp) protein (288aa)
Pyruvate formate lyase activating enzyme n=2 Tax=Escherichia coli RepID=M2P5C0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AKE59975.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L2_040_124G1_scaffold_401_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8806..10353)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=2 Tax=Salmonella enterica I RepID=V2IN96_SALAB
Uncharacterized protein {ECO:0000313|EMBL:KEY51045.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L2_040_124G1_scaffold_401_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10615..11394
DNA (780bp) protein (260aa)
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:AKE59973.1}; EC=4.1.2.4 {ECO:0000313|EMBL:AKE59973.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BEW7_9ENTR
L2_040_124G1_scaffold_401_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11517..12839
DNA (1323bp) protein (441aa)
deoA; thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase n=1 Tax=Salmonella bongori (strain ATCC 43975 / DSM 13772 / NCTC 12419) RepID=F8VIC9_SALBC
Thymidine phosphorylase {ECO:0000313|EMBL:AKE59972.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L2_040_124G1_scaffold_401_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12891..14114
DNA (1224bp) protein (408aa)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Enterobacter sp. MGH 34 RepID=V3M6K9_9ENTR
Phosphopentomutase {ECO:0000313|EMBL:AKE59971.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L2_040_124G1_scaffold_401_16
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14127..14939
DNA (813bp) protein (271aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
pup; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170 RepID=V2J5J5_SALDZ
L2_040_124G1_scaffold_401_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15036..16052)
DNA (1017bp) protein (339aa)
lplA; lipoate-protein ligase A (EC:6.3.2.-)
Lipoate-protein ligase A n=6 Tax=Escherichia RepID=LPLA_ESCF3
Lipoate--protein ligase {ECO:0000313|EMBL:AKE59970.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L2_040_124G1_scaffold_401_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16054..16722)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALX1_CITK8
Uncharacterized protein {ECO:0000313|EMBL:KEY51039.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L2_040_124G1_scaffold_401_19
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16839..17807
DNA (969bp) protein (323aa)
serB; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase SerB n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BEX4_9ENTR
Phosphoserine phosphatase {ECO:0000313|EMBL:KDF09117.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L2_040_124G1_scaffold_401_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17819..19201
DNA (1383bp) protein (461aa)
DNA repair protein radA n=2 Tax=Salmonella bongori RepID=F8VJD4_SALBC
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
radA; DNA repair protein
L2_040_124G1_scaffold_401_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19223..20455
DNA (1233bp) protein (411aa)
Transcriptional regulator {ECO:0000313|EMBL:AKE59966.1}; EC=2.7.7.1 {ECO:0000313|EMBL:AKE59966.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Transcriptional regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRZ9_CITRI
nadR; transcriptional regulator
L2_040_124G1_scaffold_401_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20478..21377
DNA (900bp) protein (300aa)
Putative LysR-family transcriptional regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS00_CITRI
LysR family transcriptional regulator {ECO:0000313|EMBL:AKE59965.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
LysR family transcriptional regulator
L2_040_124G1_scaffold_401_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21385..22278)
DNA (894bp) protein (298aa)
Chromosome initiation inhibitor n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BGJ0_9ENTR
Chromosome replication initiation inhibitor protein {ECO:0000313|EMBL:AKE59964.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
chromosome replication initiation inhibitor protein
L2_040_124G1_scaffold_401_24
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22438..23097
DNA (660bp) protein (220aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
rpiA; ribose 5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS02_CITRI
L2_040_124G1_scaffold_401_25
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23365..24597
DNA (1233bp) protein (411aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS03_CITRI
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:GAL49998.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
serA; D-3-phosphoglycerate dehydrogenase
L2_040_124G1_scaffold_401_26
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24971..25534)
DNA (564bp) protein (188aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salmonella bongori N268-08 RepID=S5NC66_SALBN
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:AKE59961.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
5-formyltetrahydrofolate cyclo-ligase
L2_040_124G1_scaffold_401_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25615..25902
DNA (288bp) protein (96aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=J1G4S3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX62169.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_040_124G1_scaffold_401_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25828..26157)
DNA (330bp) protein (110aa)
Cell division protein ZapA n=11 Tax=Enterobacteriaceae RepID=C1MB68_9ENTR
Z-ring-associated protein
Cell division protein ZapA {ECO:0000256|HAMAP-Rule:MF_02012, ECO:0000256|SAAS:SAAS00072473}; Z ring-associated protein ZapA {ECO:0000256|HAMAP-Rule:MF_02012}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_040_124G1_scaffold_401_29
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26325..26903
DNA (579bp) protein (193aa)
UPF0149 protein HMPREF9428_03154 n=8 Tax=Enterobacteriaceae RepID=G9S9F7_CITFR
FIG001590: Putative conserved exported protein {ECO:0000313|EMBL:CEJ65447.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hypothetical protein
L2_040_124G1_scaffold_401_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26928..28253
DNA (1326bp) protein (442aa)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CDL39097.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CDL39097.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Proline aminopeptidase P II n=3 Tax=Citrobacter RepID=J0VTP9_9ENTR
proline aminopeptidase P II
Displaying items 1-30 of 34 in total

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