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L2_040_124G1_scaffold_410

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_410_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..521)
DNA (519bp) protein (173aa)
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:KEL81061.1}; EC=3.4.21.- {ECO:0000313|EMBL:KEL81061.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
D-alanyl-D-alanine endopeptidase n=7 Tax=Citrobacter RepID=G9SLL6_CITFR
pbpG; D-alanyl-D-alanine endopeptidase
L2_040_124G1_scaffold_410_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..1289)
DNA (588bp) protein (196aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=K8QZF8_CITFR
Membrane protein {ECO:0000313|EMBL:KJC06539.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_040_124G1_scaffold_410_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1532..2101
DNA (570bp) protein (190aa)
Inner membrane protein yohD n=1 Tax=Citrobacter sp. KTE30 RepID=R8UWS8_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC10623.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_040_124G1_scaffold_410_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2139..3506)
DNA (1368bp) protein (456aa)
Multidrug resistance outer membrane protein MdtQ n=3 Tax=Citrobacter RepID=R1HIL6_CITFR
Multidrug resistance outer membrane protein mdtQ {ECO:0000313|EMBL:ETX69508.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
multidrug resistance outer membrane protein MdtQ
L2_040_124G1_scaffold_410_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3748..4482
DNA (735bp) protein (245aa)
Type 11 methyltransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QVQ9_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX69509.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
SAM-dependent methyltransferase
L2_040_124G1_scaffold_410_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4705..5643)
DNA (939bp) protein (313aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
tRNA-dihydrouridine synthase n=1 Tax=Citrobacter sp. KTE30 RepID=R8URT9_9ENTR
tRNA-dihydrouridine synthase C
L2_040_124G1_scaffold_410_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5705..6898)
DNA (1194bp) protein (398aa)
Salicylate hydroxylase {ECO:0000313|EMBL:KJC10627.1}; EC=1.14.13.1 {ECO:0000313|EMBL:KJC10627.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
salicylate hydroxylase (EC:1.14.13.1)
Salicylate hydroxylase n=2 Tax=Citrobacter RepID=K8QZF3_CITFR
L2_040_124G1_scaffold_410_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6913..7557)
DNA (645bp) protein (215aa)
Maleylacetoacetate isomerase {ECO:0000313|EMBL:KEL81054.1}; EC=5.2.1.2 {ECO:0000313|EMBL:KEL81054.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Glutathione-S-transferase-family protein n=3 Tax=Citrobacter RepID=J0M1G6_9ENTR
maleylacetoacetate isomerase
L2_040_124G1_scaffold_410_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7566..8267)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8USN7_9ENTR
Fumarylacetoacetate (FAA) hydrolase family protein {ECO:0000313|EMBL:KEL81053.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
5-carboxymethyl-2-hydroxymuconate isomerase
L2_040_124G1_scaffold_410_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8283..9320)
DNA (1038bp) protein (346aa)
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:KEL81052.1}; EC=1.13.11.4 {ECO:0000313|EMBL:KEL81052.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Gentisate 1,2-dioxygenase n=3 Tax=Citrobacter RepID=K8QVQ4_CITFR
gentisate 1,2-dioxygenase
L2_040_124G1_scaffold_410_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9332..10690)
DNA (1359bp) protein (453aa)
Aromatic acid:H+ symporter (AAHS) family MFS transporter n=4 Tax=Citrobacter RepID=J0LV79_9ENTR
4-hydroxybenzoate transporter {ECO:0000313|EMBL:KJC06530.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
4-hydroxybenzoate transporter
L2_040_124G1_scaffold_410_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10817..11725
DNA (909bp) protein (303aa)
Transcriptional regulator n=3 Tax=Citrobacter RepID=J1FZ59_9ENTR
Putative transcriptional regulator {ECO:0000313|EMBL:CDL37090.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_040_124G1_scaffold_410_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11857..12255
DNA (399bp) protein (133aa)
UPF0299 membrane protein WYG_3543 n=6 Tax=Citrobacter RepID=J0M1G0_9ENTR
UPF0299 membrane protein P834_07365 {ECO:0000256|HAMAP-Rule:MF_01144}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_410_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12252..12947
DNA (696bp) protein (232aa)
Inner membrane protein yohK n=8 Tax=Citrobacter RepID=C1M6I2_9ENTR
Inner membrane protein yohK {ECO:0000313|EMBL:ETX63712.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_040_124G1_scaffold_410_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13096..13980
DNA (885bp) protein (295aa)
Cytidine deaminase {ECO:0000256|HAMAP-Rule:MF_01558, ECO:0000256|PIRNR:PIRNR006334}; EC=3.5.4.5 {ECO:0000256|HAMAP-Rule:MF_01558, ECO:0000256|PIRNR:PIRNR006334};; Cytidine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01558}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=6 Tax=Citrobacter RepID=J1FZB4_9ENTR
L2_040_124G1_scaffold_410_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14115..14834
DNA (720bp) protein (240aa)
Protein sanA n=9 Tax=Citrobacter RepID=C1M6I4_9ENTR
Protein sanA {ECO:0000313|EMBL:ETX63714.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
vancomycin high temperature exclusion protein
L2_040_124G1_scaffold_410_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14837..15076
DNA (240bp) protein (80aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=K8QZE5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL81045.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_040_124G1_scaffold_410_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15310..16551
DNA (1242bp) protein (414aa)
Dihydropyrimidine dehydrogenase, NADH-dependent, subunit A n=1 Tax=Citrobacter sp. KTE30 RepID=R8UWU3_9ENTR
Dihydropyrimidine dehydrogenase, NADH-dependent, subunit A {ECO:0000313|EMBL:ETX69522.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
dihydropyrimidine dehydrogenase
L2_040_124G1_scaffold_410_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16545..17780
DNA (1236bp) protein (412aa)
Dihydroorotate dehydrogenase family protein n=4 Tax=Citrobacter RepID=J0VMU8_9ENTR
Dihydropyrimidine dehydrogenase, NADH-dependent, subunit B {ECO:0000313|EMBL:ETX69523.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
dihydropyrimidine dehydrogenase
L2_040_124G1_scaffold_410_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17838..18848)
DNA (1011bp) protein (337aa)
Galactoside transport system permease mglC n=10 Tax=Citrobacter RepID=C1M6I6_9ENTR
Galactoside transport system permease mglC {ECO:0000313|EMBL:ETX69524.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
mglC; beta-methylgalactoside transporter permease
L2_040_124G1_scaffold_410_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18864..20384)
DNA (1521bp) protein (507aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Galactose/methyl galactoside import ATP-binding protein MglA n=8 Tax=Citrobacter RepID=C1M6I7_9ENTR
sugar ABC transporter ATP-binding protein
L2_040_124G1_scaffold_410_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20456..21454)
DNA (999bp) protein (333aa)
D-galactose-binding periplasmic protein n=10 Tax=Enterobacteriaceae RepID=DGAL_CITFR
D-galactose-binding periplasmic protein {ECO:0000313|EMBL:ETX63718.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
sugar ABC transporter substrate-binding protein
L2_040_124G1_scaffold_410_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21747..22772)
DNA (1026bp) protein (342aa)
DNA-binding transcriptional regulator GalS n=6 Tax=Citrobacter RepID=J0M1E9_9ENTR
Bacterial regulatory s, lacI family protein {ECO:0000313|EMBL:KEL81039.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional regulator
L2_040_124G1_scaffold_410_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22917..24074)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QPJ9_CITFR
Inner membrane protein {ECO:0000313|EMBL:ETX69528.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_410_25
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24089..24757)
DNA (669bp) protein (223aa)
folE; GTP cyclohydrolase (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
GTP cyclohydrolase 1 n=12 Tax=Enterobacteriaceae RepID=D4B7U5_9ENTR
L2_040_124G1_scaffold_410_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25080..25916
DNA (837bp) protein (279aa)
S-formylglutathione hydrolase yeiG n=3 Tax=Citrobacter RepID=J0LV62_9ENTR
S-formylglutathione hydrolase yeiG {ECO:0000313|EMBL:ETX69530.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
S-formylglutathione hydrolase
L2_040_124G1_scaffold_410_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26196..28181
DNA (1986bp) protein (662aa)
TonB-dependent receptor plug n=3 Tax=Citrobacter RepID=J1FZ45_9ENTR
TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CDL37106.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
outer membrane siderophore receptor
L2_040_124G1_scaffold_410_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28247..29716)
DNA (1470bp) protein (490aa)
Lysine-specific permease n=5 Tax=Citrobacter RepID=J0M1E3_9ENTR
Lysine-specific permease {ECO:0000313|EMBL:CDL37107.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
lysine transporter
L2_040_124G1_scaffold_410_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29912..30793)
DNA (882bp) protein (294aa)
Dna-binding transcriptional regulator n=3 Tax=Citrobacter RepID=J0VMT7_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:ETX69533.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_040_124G1_scaffold_410_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30972..32021
DNA (1050bp) protein (350aa)
Inner membrane protein yeih n=5 Tax=Citrobacter RepID=J1FZ98_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC10654.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
Displaying items 1-30 of 31 in total

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