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L2_040_124G1_scaffold_446

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_446_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(276..629)
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5G7_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
iojap family protein
L2_040_124G1_scaffold_446_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(642..1241)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44282.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
conserved hypothetical protein TIGR00488
L2_040_124G1_scaffold_446_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1256..1876)
DNA (621bp) protein (207aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ06_9CLOT
L2_040_124G1_scaffold_446_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2154..2447)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44284.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
conserved hypothetical protein TIGR00253
L2_040_124G1_scaffold_446_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2513..3802)
DNA (1290bp) protein (430aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ83_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Obg family GTPase CgtA
L2_040_124G1_scaffold_446_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3921..4211)
DNA (291bp) protein (97aa)
50S ribosomal protein L27 n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5H4_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
50S ribosomal protein L27
L2_040_124G1_scaffold_446_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4215..4556)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44287.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted ribosomal protein
L2_040_124G1_scaffold_446_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4568..4876)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ10_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LSU ribosomal protein L21P
L2_040_124G1_scaffold_446_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5007..6446)
DNA (1440bp) protein (480aa)
Cation transport protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUP8_9FIRM
Cation transport protein {ECO:0000313|EMBL:EEQ61742.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cation transporter
L2_040_124G1_scaffold_446_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6460..7815)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44290.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
TrkA-N domain-containing protein
L2_040_124G1_scaffold_446_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7828..9027)
DNA (1200bp) protein (400aa)
Ribonuclease G n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5H9_9CLOT
Ribonuclease G {ECO:0000313|EMBL:CCY44291.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RNA-binding protein AU-1/Ribonuclease E/G
L2_040_124G1_scaffold_446_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9027..9773)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5V4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44292.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_446_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9848..11713)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44293.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
radical SAM protein
L2_040_124G1_scaffold_446_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11962..12288)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44294.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_446_15
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12389..14806)
DNA (2418bp) protein (806aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JU46_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDE67151.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Signal transduction histidine kinase
L2_040_124G1_scaffold_446_16
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14809..16653)
DNA (1845bp) protein (615aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Blautia sp. CAG:37 RepID=R7JT05_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDE67150.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
ABC-type sugar transport system, periplasmic component
L2_040_124G1_scaffold_446_17
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16865..17287)
DNA (423bp) protein (141aa)
Signal transduction histidine kinase n=1 Tax=Coprococcus catus GD/7 RepID=D4JBJ8_9FIRM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBK81719.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_040_124G1_scaffold_446_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17284..18153)
DNA (870bp) protein (290aa)
Response regulator receiver domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D239_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI90840.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Signal transduction histidine kinase
L2_040_124G1_scaffold_446_19
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18724..19428)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVX4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG36577.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
L2_040_124G1_scaffold_446_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19382..20224)
DNA (843bp) protein (281aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZU84_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM86911.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
L2_040_124G1_scaffold_446_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20449..20664)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77564.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Hpt domain.
L2_040_124G1_scaffold_446_22
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20712..21107)
DNA (396bp) protein (132aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAC8_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEG36579.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_040_124G1_scaffold_446_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21076..21993)
DNA (918bp) protein (306aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77565.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_124G1_scaffold_446_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22067..24934)
DNA (2868bp) protein (956aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77566.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_124G1_scaffold_446_25
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25596..26546
DNA (951bp) protein (317aa)
Cell wall hydrolyses involved in spore germination n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSE9_9FIRM
Cell wall hydrolyses involved in spore germination
Cell wall hydrolyses involved in spore germination {ECO:0000313|EMBL:CBL40731.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_040_124G1_scaffold_446_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26631..28004)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41110.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
xanthine/uracil/vitamin C permease
L2_040_124G1_scaffold_446_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28240..29490)
DNA (1251bp) protein (417aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase T. Metallo peptidase. MEROPS family M20B (EC:3.4.11.4)
Peptidase T n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG70_9CLOT
Displaying 27 items

View Taxonomy