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L2_040_124G1_scaffold_482

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_482_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..598
DNA (597bp) protein (199aa)
Thiamine biosynthesis lipoprotein ApbE n=3 Tax=Citrobacter RepID=J1FYX8_9ENTR
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:ETX63781.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
thiamine biosynthesis protein ApbE
L2_040_124G1_scaffold_482_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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678..1742
DNA (1065bp) protein (355aa)
Regulatory protein ada n=1 Tax=Citrobacter sp. KTE30 RepID=R8UX27_9ENTR
Regulatory protein ada {ECO:0000313|EMBL:ETX69607.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
6-O-methylguanine DNA methyltransferase
L2_040_124G1_scaffold_482_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1742..2392
DNA (651bp) protein (217aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:KEL80949.1}; EC=1.14.11.- {ECO:0000313|EMBL:KEL80949.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
DNA repair system specific for alkylated DNA n=5 Tax=Citrobacter RepID=J1FZ50_9ENTR
alpha-ketoglutarate-dependent dioxygenase
L2_040_124G1_scaffold_482_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2468..4111
DNA (1644bp) protein (548aa)
ABC transporter ATP-binding protein YojI n=5 Tax=Citrobacter RepID=J0VMM4_9ENTR
Multidrug transporter membrane component/ATP-binding component {ECO:0000313|EMBL:KJC10716.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
multidrug transporter membrane component/ATP-binding component
L2_040_124G1_scaffold_482_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4217..5653
DNA (1437bp) protein (479aa)
Magnesium transporter n=5 Tax=Citrobacter RepID=J0M174_9ENTR
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dihydroorotate dehydrogenase
L2_040_124G1_scaffold_482_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5616..6911)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8USX0_9ENTR
Sulfate transporter {ECO:0000313|EMBL:ETX69603.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transporter
L2_040_124G1_scaffold_482_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7142..8803
DNA (1662bp) protein (554aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Probable malate:quinone oxidoreductase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UX23_9ENTR
malate:quinone oxidoreductase
L2_040_124G1_scaffold_482_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8896..9405)
DNA (510bp) protein (170aa)
Ecotin n=4 Tax=Citrobacter RepID=J1FZ53_9ENTR
Ecotin {ECO:0000256|HAMAP-Rule:MF_00706, ECO:0000256|SAAS:SAAS00013245}; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ecotin
L2_040_124G1_scaffold_482_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9806..10297
DNA (492bp) protein (164aa)
Ferredoxin-type protein napF n=5 Tax=Citrobacter RepID=C1M6P4_9ENTR
Ferredoxin {ECO:0000313|EMBL:KJC10713.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ferredoxin
L2_040_124G1_scaffold_482_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10287..10550
DNA (264bp) protein (88aa)
Protein napD n=7 Tax=Citrobacter RepID=C1M6P3_9ENTR
Periplasmic nitrate reductase component NapD {ECO:0000313|EMBL:CDL36751.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
nitrate reductase
L2_040_124G1_scaffold_482_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..13033
DNA (2487bp) protein (829aa)
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Nitrate reductase n=4 Tax=Citrobacter RepID=J1FYY8_9ENTR
nitrate reductase
L2_040_124G1_scaffold_482_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13040..13735
DNA (696bp) protein (232aa)
Quinol dehydrogenase periplasmic component n=6 Tax=Citrobacter RepID=J0LV06_9ENTR
Ferredoxin {ECO:0000313|EMBL:ETX69597.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
napG; quinol dehydrogenase
L2_040_124G1_scaffold_482_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13722..14585
DNA (864bp) protein (288aa)
NapH/MauN family ferredoxin-type protein n=7 Tax=Citrobacter RepID=C1M6P0_9ENTR
Ferredoxin {ECO:0000313|EMBL:ETX63769.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
napH; quinol dehydrogenase
L2_040_124G1_scaffold_482_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14582..15031
DNA (450bp) protein (150aa)
Periplasmic nitrate reductase, electron transfer subunit n=3 Tax=Citrobacter RepID=J0VMN4_9ENTR
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
napB; nitrate reductase
L2_040_124G1_scaffold_482_15
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15041..15643
DNA (603bp) protein (201aa)
Cytochrome c-type protein NapC n=9 Tax=Citrobacter RepID=C1M6N8_9ENTR
cytochrome C
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_124G1_scaffold_482_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15664..16284
DNA (621bp) protein (207aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Cytochrome c biogenesis protein CcmA n=6 Tax=Citrobacter RepID=J1FYZ3_9ENTR
cytochrome C biogenesis protein CcmA
L2_040_124G1_scaffold_482_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16281..16940
DNA (660bp) protein (220aa)
Heme exporter protein B n=9 Tax=Citrobacter RepID=C1M6N6_9ENTR
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
heme ABC transporter permease
L2_040_124G1_scaffold_482_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17017..17754
DNA (738bp) protein (246aa)
Heme exporter protein C n=7 Tax=Citrobacter RepID=G9SLT9_CITFR
Heme ABC transporter permease {ECO:0000313|EMBL:KJC09894.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
heme ABC transporter permease
L2_040_124G1_scaffold_482_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17751..17963
DNA (213bp) protein (71aa)
Heme exporter protein C n=6 Tax=Citrobacter RepID=J0VMP0_9ENTR
Heme exporter protein D {ECO:0000313|EMBL:ETX69590.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cytochrome C biogenesis protein CcmD
L2_040_124G1_scaffold_482_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17960..18439
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Citrobacter sp. KTE30 RepID=R8USS4_9ENTR
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cytochrome C biogenesis protein CcmE
L2_040_124G1_scaffold_482_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18436..20391
DNA (1956bp) protein (652aa)
Heme lyase n=3 Tax=Citrobacter RepID=J1FYZ8_9ENTR
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:ETX69588.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cytochrome C biogenesis protein CcmF
L2_040_124G1_scaffold_482_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20388..20945
DNA (558bp) protein (186aa)
Heme lyase/disulfide oxidoreductase n=3 Tax=Citrobacter RepID=J0LV17_9ENTR
Thiol:disulfide interchange protein DsbE {ECO:0000313|EMBL:ETX69587.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
thiol:disulfide interchange protein DsbE
L2_040_124G1_scaffold_482_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20942..21991
DNA (1050bp) protein (350aa)
Cytochrome c-type biogenesis protein ccmH n=3 Tax=Citrobacter RepID=J1FZ65_9ENTR
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH {ECO:0000313|EMBL:CDL36138.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
heme lyase subunit CcmH
L2_040_124G1_scaffold_482_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22093..22740)
DNA (648bp) protein (216aa)
Nitrate/nitrite response regulator protein NarL n=6 Tax=Citrobacter RepID=J0VMP5_9ENTR
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KEL80970.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional regulator NarP
L2_040_124G1_scaffold_482_25
unknown

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comp(22787..22900)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_040_124G1_scaffold_482_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22949..23098
DNA (150bp) protein (50aa)
Transposase n=3 Tax=Citrobacter RepID=J0M197_9ENTR
Mobile element protein {ECO:0000313|EMBL:CDL36136.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
FIG01046424: hypothetical protein
L2_040_124G1_scaffold_482_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23394..23636)
DNA (243bp) protein (81aa)
DinI family protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BIH9_CITFR
Virulence protein MsgA {ECO:0000313|EMBL:ETX69583.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
virulence protein MsgA
L2_040_124G1_scaffold_482_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24525..26285)
DNA (1761bp) protein (587aa)
Inner membrane protein yejm n=3 Tax=Citrobacter RepID=J0LV22_9ENTR
Inner membrane protein yejM {ECO:0000313|EMBL:ETX69581.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_124G1_scaffold_482_29
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26317..26544)
DNA (228bp) protein (76aa)
UPF0352 protein CSAG_02051 n=12 Tax=Enterobacteriaceae RepID=C1M6M7_9ENTR
hypothetical protein
UPF0352 protein WG82_12305 {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_040_124G1_scaffold_482_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26679..27686
DNA (1008bp) protein (336aa)
Nucleoid-associated protein CSAG_02050 n=8 Tax=Citrobacter RepID=C1M6M6_9ENTR
Nucleoid-associated protein P835_02878 {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
nucleoid-associated protein NdpA
Displaying items 1-30 of 31 in total

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