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L2_040_124G1_scaffold_496

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_496_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..234
DNA (234bp) protein (78aa)
Iron-sulfur cluster-binding protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SEK4_CITFR
amino acid dehydrogenase
Amino acid dehydrogenase {ECO:0000313|EMBL:KJC07695.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_040_124G1_scaffold_496_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227..922
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8R4G2_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL78830.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_040_124G1_scaffold_496_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(972..2315)
DNA (1344bp) protein (448aa)
High-affinity gluconate transporter n=8 Tax=Enterobacteriaceae RepID=G9SEK2_CITFR
gluconate permease
High-affinity gluconate transporter {ECO:0000313|EMBL:EIQ53025.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
L2_040_124G1_scaffold_496_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2575..3759
DNA (1185bp) protein (395aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=2 Tax=Citrobacter freundii RepID=K8R0I7_CITFR
L2_040_124G1_scaffold_496_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3838..5313
DNA (1476bp) protein (492aa)
D-mannonate oxidoreductase n=2 Tax=Citrobacter RepID=K8QU91_CITFR
Mannitol dehydrogenase Rossmann domain protein {ECO:0000313|EMBL:KEL78827.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
D-mannonate oxidoreductase
L2_040_124G1_scaffold_496_6
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5494..6219
DNA (726bp) protein (242aa)
DNA-binding transcriptional repressor UxuR n=7 Tax=Enterobacteriaceae RepID=K8QSF8_CITFR
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EIQ53022.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
transcriptional regulator
L2_040_124G1_scaffold_496_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6868..7071
DNA (204bp) protein (68aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=J1G310_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC13625.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_124G1_scaffold_496_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7192..8169
DNA (978bp) protein (326aa)
Outer membrane pore protein E n=4 Tax=Citrobacter RepID=J0LYW8_9ENTR
Porin {ECO:0000313|EMBL:KJC13624.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
porin
L2_040_124G1_scaffold_496_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8217..8435)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0J3_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC07687.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_040_124G1_scaffold_496_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8626..9813)
DNA (1188bp) protein (396aa)
Sugar transporter n=5 Tax=Citrobacter RepID=J0M5C8_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX72004.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_496_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9911..10375)
DNA (465bp) protein (155aa)
Gcn5-related n-acetyltransferase n=3 Tax=Citrobacter RepID=J0VRM1_9ENTR
GNAT family acetyltransferase {ECO:0000313|EMBL:KJC07685.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
GCN5-like N-acetyltransferase
L2_040_124G1_scaffold_496_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10389..11669)
DNA (1281bp) protein (427aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=J1G307_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX72006.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_124G1_scaffold_496_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11745..12671)
DNA (927bp) protein (309aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=C1MC48_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72007.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
LysR family transcriptional regulator
L2_040_124G1_scaffold_496_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12891..14123
DNA (1233bp) protein (411aa)
Sodium:dicarboxylate symporter n=7 Tax=Citrobacter RepID=J1G2V1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72008.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sodium:dicarboxylate symporter
L2_040_124G1_scaffold_496_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14154..15344
DNA (1191bp) protein (397aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KJC07681.1}; EC=4.4.1.8 {ECO:0000313|EMBL:KJC07681.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=6 Tax=Citrobacter RepID=J0M5C4_9ENTR
L2_040_124G1_scaffold_496_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15425..16666)
DNA (1242bp) protein (414aa)
Multidrug resistance protein n=3 Tax=Citrobacter RepID=J0VRL5_9ENTR
Multidrug resistance protein mdtM {ECO:0000313|EMBL:ETX72010.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
multidrug transporter
L2_040_124G1_scaffold_496_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16992..17642)
DNA (651bp) protein (217aa)
Amino acid exporter n=3 Tax=Citrobacter RepID=J1G303_9ENTR
Amino acid transporter LysE {ECO:0000313|EMBL:ETX72011.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
threonine transporter RhtB
L2_040_124G1_scaffold_496_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17691..18506)
DNA (816bp) protein (272aa)
AraC family transcriptional regulator n=2 Tax=Citrobacter RepID=M3CF15_CITFR
AraC family transcriptional regulator {ECO:0000313|EMBL:KJC07678.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
AraC family transcriptional regulator
L2_040_124G1_scaffold_496_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18737..19699
DNA (963bp) protein (321aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=R1FTQ2_CITFR
Transposase {ECO:0000313|EMBL:ETX72013.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_496_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19751..21163)
DNA (1413bp) protein (471aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase {ECO:0000313|EMBL:CDL36352.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDL36352.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Transcriptional family classes i and ii n=3 Tax=Citrobacter RepID=J0VRK9_9ENTR
GntR family transcriptional regulator
L2_040_124G1_scaffold_496_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21341..21505
DNA (165bp) protein (55aa)
Cytoplasmic protein n=7 Tax=Citrobacter RepID=J1G2Z9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72015.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_496_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21653..22117
DNA (465bp) protein (155aa)
Transcriptional regulator n=5 Tax=Citrobacter RepID=J0LYV8_9ENTR
MarR family transcriptional regulator {ECO:0000313|EMBL:ETX72016.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
MarR family transcriptional regulator
L2_040_124G1_scaffold_496_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22124..23191
DNA (1068bp) protein (356aa)
Secretion protein HlyD family protein n=3 Tax=Citrobacter RepID=J1G2U4_9ENTR
Secretion protein HlyD {ECO:0000313|EMBL:ETX72017.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hemolysin secretion protein D
L2_040_124G1_scaffold_496_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23181..24245
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V2N7_9ENTR
1,4-alpha-glucan branching protein {ECO:0000313|EMBL:KJC13611.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
1,4-alpha-glucan branching protein
L2_040_124G1_scaffold_496_25
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24398..24685
DNA (288bp) protein (96aa)
Inner membrane protein n=3 Tax=Citrobacter RepID=J0VRK3_9ENTR
Membrane protein {ECO:0000313|EMBL:KKC62407.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L2_040_124G1_scaffold_496_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24672..24974
DNA (303bp) protein (101aa)
Toxin-antitoxin system protein n=3 Tax=Citrobacter RepID=J1G2Z5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDF09659.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
L2_040_124G1_scaffold_496_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25038..25994)
DNA (957bp) protein (319aa)
p47k family protein n=3 Tax=Citrobacter RepID=J0LYV4_9ENTR
GTP-binding protein {ECO:0000313|EMBL:ETX72019.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
GTP-binding protein
L2_040_124G1_scaffold_496_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26007..26201)
DNA (195bp) protein (65aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=C1MC61_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX72020.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_124G1_scaffold_496_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26312..27307)
DNA (996bp) protein (332aa)
Carbon starvation protein n=3 Tax=Citrobacter RepID=J0M5B2_9ENTR
Inner membrane protein YjiY {ECO:0000313|EMBL:ETX72021.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
carbon starvation protein A
Displaying 29 items

View Taxonomy